Implementation of Augmented Network Log Anomaly Detection Procedures (anomalyDetection)
Implements procedures to aid in detecting network log anomalies. By combining various multivariate analytic approaches relevant to network anomaly detection, it provides cyber analysts efficient means to detect suspected anomalies requiring further evaluation.

Identifying Trait-Relevant Functional Annotations (rolypoly)
Using enrichment of genome-wide association summary statistics to identify trait-relevant cellular functional annotations.

Generalized Linear Mixed Models using Template Model Builder (glmmTMB)
Fit linear and generalized linear mixed models with various extensions, including zero-inflation. The models are fitted using maximum likelihood estimation via ‘TMB’ (Template Model Builder). Random effects are assumed to be Gaussian on the scale of the linear predictor and are integrated out using the Laplace approximation. Gradients are calculated using automatic differentiation.

Read and Write CSV Files with Selected Conventions (csv)
Reads and writes CSV with selected conventions. Uses the same generic function for reading and writing to promote consistent formats.