A Bunch of Structure and Sequence Analysis (BoSSA)
Reads and plots phylogenetic placements obtained using the ‘epa’, ‘pplacer’ and ‘guppy’ softwares.

Tomoka Ohta D Statistics (ohtadstats)
Calculate’s Tomoka Ohta’s partitioning of linkage disequilibrium, deemed D-statistics, for pairs of loci. Beissinger et al. (2016) <doi:10.1038/hdy.2015.81>.

Linear Algorithm for Simulating Quantiles in Multiscale Change-Point Segmentation Problem (linearQ)
It is a linear algorithm to simulate quantiles of multiscale statistics under hull hypothesis for multiscale change-point segmentation. The reference is in preparation.

Sparse Gaussian Markov Random Field Mixtures for Anomaly Detection (sGMRFmix)
An implementation of sparse Gaussian Markov random field mixtures presented by Ide et al. (2016) <doi:10.1109/ICDM.2016.0119>. It provides a novel anomaly detection method for multivariate noisy sensor data. It can automatically handle multiple operational modes. And it can also compute variable-wise anomaly scores.

Bayesian Projected Normal Regression Models for Circular Data (bpnreg)
Fitting Bayesian multiple and mixed-effect regression models for circular data based on the projected normal distribution. Both continuous and categorical predictors can be included. Sampling from the posterior is performed via an MCMC algorithm. Posterior descriptives of all parameters, model fit statistics and Bayes factors for hypothesis tests for inequality constrained hypotheses are provided. See Cremers, Mulder & Klugkist (2018) <doi:10.1111/bmsp.12108> and Nuñez-Antonio & Guttiérez-Peña (2014) <doi:10.1016/j.csda.2012.07.025>.

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