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WhatIs-P

P-Tree Programming We propose a novel method for automatic program synthesis. P-Tree Programming represents the program search space through a single probabilistic prototype tree. From this prototype tree we form program instances which we evaluate on a given problem. The error values from the evaluations are propagated through the prototype tree. We use them to update the probability distributions that determine the symbol choices of further instances. The iterative method is applied to several symbolic regression benchmarks from the literature. It outperforms standard Genetic Programming to a large extend. Furthermore, it relies on a concise set of parameters which are held constant for all problems. The algorithm can be employed for most of the typical computational intelligence tasks such as classification, automatic program induction, and symbolic regression.
Pabon Lasso Pabon Lasso is a graphical method for monitoring the efficiency of different wards of a hospital or different hospitals.Pabon Lasso graph is divided into 4 parts which are created after drawing the average of BTR and BOR. The part in the left-down side is Zone I, left-up side is Zone II, Right-up side part is Zone III and the last part is Zone IV.
PabonLasso
Pachinko Allocation Model
(PAM)
In machine learning and natural language processing, the pachinko allocation model (PAM) is a topic model. Topic models are a suite of algorithms to uncover the hidden thematic structure of a collection of documents. The algorithm improves upon earlier topic models such as latent Dirichlet allocation (LDA) by modeling correlations between topics in addition to the word correlations which constitute topics. PAM provides more flexibility and greater expressive power than latent Dirichlet allocation. While first described and implemented in the context of natural language processing, the algorithm may have applications in other fields such as bioinformatics. The model is named for pachinko machines – a game popular in Japan, in which metal balls bounce down around a complex collection of pins until they land in various bins at the bottom.
http://…/pam-icml06.pdf
Pachinkogram Conditional Probabilities Visualisation
Pachyderm MapReduce without Hadoop Analyze massive datasets with Docker: Pachyderm is an open source MapReduce engine that uses Docker containers for distributed computations. Pachyderm is a completely new MapReduce engine built on top of modern tools. The biggest benefit of starting from scratch is that we get to leverage amazing advances in open source infrastructure, such as Docker and CoreOS.
https://…/pfs
Replacing Hadoop
Packet Capture
(pcap)
In the field of computer network administration, pcap (packet capture) consists of an application programming interface (API) for capturing network traffic. Unix-like systems implement pcap in the libpcap library; Windows uses a port of libpcap known as WinPcap. Monitoring software may use libpcap and/or WinPcap to capture packets travelling over a network and, in newer versions, to transmit packets on a network at the link layer, as well as to get a list of network interfaces for possible use with libpcap or WinPcap. The pcap API is written in C, so other languages such as Java, .NET languages, and scripting languages generally use a wrapper; no such wrappers are provided by libpcap or WinPcap itself. C++ programs may link directly to the C API or use an object-oriented wrapper.
Padé Approximant In mathematics a Padé approximant is the ‘best’ approximation of a function by a rational function of given order – under this technique, the approximant’s power series agrees with the power series of the function it is approximating. The technique was developed around 1890 by Henri Padé, but goes back to Georg Frobenius who introduced the idea and investigated the features of rational approximations of power series. The Padé approximant often gives better approximation of the function than truncating its Taylor series, and it may still work where the Taylor series does not converge. For these reasons Padé approximants are used extensively in computer calculations. They have also been used as auxiliary functions in Diophantine approximation and transcendental number theory, though for sharp results ad hoc methods in some sense inspired by the Padé theory typically replace them.
http://…ing Padé Approximant Coefficients Using R
Pade
PageRank PageRank is an algorithm used by Google Search to rank websites in their search engine results. PageRank was named after Larry Page, one of the founders of Google. PageRank is a way of measuring the importance of website pages. According to Google: PageRank works by counting the number and quality of links to a page to determine a rough estimate of how important the website is. The underlying assumption is that more important websites are likely to receive more links from other websites.
Panel Analysis of Nonstationarity in Idiosyncratic and Common Components
(PANIC)
Decomposing a mutivariate time series into common factors and idiosyncratic components, a method called PANIC (Panel Analysis of Non-stationary in Idiosyncratic and Common components) is suggested by Bai and Ng (2004).
PANICr
Panel Data In statistics and econometrics, the term panel data refers to multi-dimensional data frequently involving measurements over time. Panel data contain observations of multiple phenomena obtained over multiple time periods for the same firms or individuals. In biostatistics, the term longitudinal data is often used instead, wherein a subject or cluster constitutes a panel member or individual in a longitudinal study. Time series and cross-sectional data are special cases of panel data that are in one dimension only (one panel member or individual for the former, one time point for the latter).
ivpanel
PANFIS++ The concept of evolving intelligent system (EIS) provides an effective avenue for data stream mining because it is capable of coping with two prominent issues: online learning and rapidly changing environments. We note at least three uncharted territories of existing EISs: data uncertainty, temporal system dynamic, redundant data streams. This book chapter aims at delivering a concrete solution of this problem with the algorithmic development of a novel learning algorithm, namely PANFIS++. PANFIS++ is a generalized version of the PANFIS by putting forward three important components: 1) An online active learning scenario is developed to overcome redundant data streams. This module allows to actively select data streams for the training process, thereby expediting execution time and enhancing generalization performance, 2) PANFIS++ is built upon an interval type-2 fuzzy system environment, which incorporates the so-called footprint of uncertainty. This component provides a degree of tolerance for data uncertainty. 3) PANFIS++ is structured under a recurrent network architecture with a self-feedback loop. This is meant to tackle the temporal system dynamic. The efficacy of the PANFIS++ has been numerically validated through numerous real-world and synthetic case studies, where it delivers the highest predictive accuracy while retaining the lowest complexity.
Paragraph Vector Many machine learning algorithms require the input to be represented as a fixed-length feature vector. When it comes to texts, one of the most common fixed-length features is bag-of-words. Despite their popularity, bag-of-words features have two major weaknesses: they lose the ordering of the words and they also ignore semantics of the words. For example, ‘powerful,’ ‘strong’ and ‘Paris’ are equally distant. In this paper, we propose Paragraph Vector, an unsupervised algorithm that learns fixed-length feature representations from variable-length pieces of texts, such as sentences, paragraphs, and documents. Our algorithm represents each document by a dense vector which is trained to predict words in the document. Its construction gives our algorithm the potential to overcome the weaknesses of bag-of-words models. Empirical results show that Paragraph Vectors outperform bag-of-words models as well as other techniques for text representations. Finally, we achieve new state-of-the-art results on several text classification and sentiment analysis tasks.
GitXiv
Paragraph Vector-based Matrix Factorization Recommender System
(ParVecMF)
Review-based recommender systems have gained noticeable ground in recent years. In addition to the rating scores, those systems are enriched with textual evaluations of items by the users. Neural language processing models, on the other hand, have already found application in recommender systems, mainly as a means of encoding user preference data, with the actual textual description of items serving only as side information. In this paper, a novel approach to incorporating the aforementioned models into the recommendation process is presented. Initially, a neural language processing model and more specifically the paragraph vector model is used to encode textual user reviews of variable length into feature vectors of fixed length. Subsequently this information is fused along with the rating scores in a probabilistic matrix factorization algorithm, based on maximum a-posteriori estimation. The resulting system, ParVecMF, is compared to a ratings’ matrix factorization approach on a reference dataset. The obtained preliminary results on a set of two metrics are encouraging and may stimulate further research in this area.
ParaGraphE Knowledge graph embedding aims at translating the knowledge graph into numerical representations by transforming the entities and relations into con- tinuous low-dimensional vectors. Recently, many methods [1, 5, 3, 2, 6] have been proposed to deal with this problem, but existing single-thread implemen- tations of them are time-consuming for large-scale knowledge graphs. Here, we design a unified parallel framework to parallelize these methods, which achieves a significant time reduction without in uencing the accuracy. We name our framework as ParaGraphE, which provides a library for parallel knowledge graph embedding. The source code can be downloaded from https: //github.com/LIBBLE/LIBBLE-MultiThread/tree/master/ParaGraphE.
Parallel and Interacting Stochastic Approximation Annealing
(PISAA)
We present the parallel and interacting stochastic approximation annealing (PISAA) algorithm, a stochastic simulation procedure for global optimisation, that extends and improves the stochastic approximation annealing (SAA) by using population Monte Carlo ideas. The standard SAA algorithm guarantees convergence to the global minimum when a square-root cooling schedule is used; however the efficiency of its performance depends crucially on its self-adjusting mechanism. Because its mechanism is based on information obtained from only a single chain, SAA may present slow convergence in complex optimisation problems. The proposed algorithm involves simulating a population of SAA chains that interact each other in a manner that ensures significant improvement of the self-adjusting mechanism and better exploration of the sampling space. Central to the proposed algorithm are the ideas of (i) recycling information from the whole population of Markov chains to design a more accurate/stable self-adjusting mechanism and (ii) incorporating more advanced proposals, such as crossover operations, for the exploration of the sampling space. PISAA presents a significantly improved performance in terms of convergence. PISAA can be implemented in parallel computing environments if available. We demonstrate the good performance of the proposed algorithm on challenging applications including Bayesian network learning and protein folding. Our numerical comparisons suggest that PISAA outperforms the simulated annealing, stochastic approximation annealing, and annealing evolutionary stochastic approximation Monte Carlo especially in high dimensional or rugged scenarios.
Parallel Augmented Maps
(PAM)
In this paper we introduce an interface for supporting ordered maps that are augmented to support quick ‘sums’ of values over ranges of the keys. We have implemented this interface as part of a C++ library called PAM (Parallel and Persistent Augmented Map library). This library supports a wide variety of functions on maps ranging from basic insertion and deletion to more interesting functions such as union, intersection, difference, filtering, extracting ranges, splitting, and range-sums. The functions in the library are parallel, persistent (meaning that functions do not affect their inputs), and work-efficient. The underlying data structure is the augmented balanced binary search tree, which is a binary search tree in which each node is augmented with a value keeping the ‘sum’ of its subtree with respect to some user supplied function. With this augmentation the library can be directly applied to many settings such as to 2D range trees, interval trees, word index searching, and segment trees. The interface greatly simplifies the implementation of such data structures while it achieves efficiency that is significantly better than previous libraries. We tested our library and its corresponding applications. Experiments show that our implementation of set functions can get up to 50+ speedup on 72 cores. As for our range tree implementation, the sequential running time is more efficient than existing libraries such as CGAL, and can get up to 42+ speedup on 72 cores.
Parallel Coordinates Parallel coordinates is a common way of visualizing high-dimensional geometry and analyzing multivariate data. To show a set of points in an n-dimensional space, a backdrop is drawn consisting of n parallel lines, typically vertical and equally spaced. A point in n-dimensional space is represented as a polyline with vertices on the parallel axes; the position of the vertex on the ith axis corresponds to the ith coordinate of the point. This visualization is closely related to time series visualization, except that it is applied to data where the axes do not correspond to points in time, and therefore do not have a natural order. Therefore, different axis arrangements may be of interest.
visova,MASS,Acinonyx
Parallel Data Assimilation Framework
(PDAF)
The Parallel Data Assimilation Framework – PDAF – is a software environment for ensemble data assimilation. PDAF simplifies the implementation of the data assimilation system with existing numerical models. With this, users can obtain a data assimilation system with less work and can focus on applying data assimilation. PDAF provides fully implemented and optimized data assimilation algorithms, in particular ensemble-based Kalman filters like LETKF and LSEIK. It allows users to easily test different assimilation algorithms and observations. PDAF is optimized for the application with large-scale models that usually run on big parallel computers and is applicable for operational applications. However, it is also well suited for smaller models and even toy models. PDAF provides a standardized interface that separates the numerical model from the assimilation routines. This allows to perform the further development of the assimilation methods and the model independently. New algorithmic developments can be readily made available through the interface such that they can be immediately applied with existing implementations. The test suite of PDAF provides small models for easy testing of algorithmic developments and for teaching data assimilation. PDAF is an open-source project. Its functionality will be further extended by input from research projects. In addition, users are welcome to contribute to the further enhancement of PDAF, e.g. by contributing additional assimilation methods or interface routines for different numerical models.
Parallel External Memory
(PEM)
In this paper, we study parallel algorithms for private-cache chip multiprocessors (CMPs), focusing on methods for foundational problems that can scale to hundreds or even thousands of cores. By focusing on private-cache CMPs, we show that we can design efficient algorithms that need no additional assumptions about the way that cores are interconnected, for we assume that all inter-processor communication occurs through the memory hierarchy. We study several fundamental problems, including prefix sums, selection, and sorting, which often form the building blocks of other parallel algorithms. Indeed, we present two sorting algorithms, a distribution sort and a mergesort. All algorithms in the paper are asymptotically optimal in terms of the parallel cache accesses and space complexity under reasonable assumptions about the relationships between the number of processors, the size of memory, and the size of cache blocks. In addition, we study sorting lower bounds in a computational model, which we call the parallel external-memory (PEM) model, that formalizes the essential properties of our algorithms for private-cache chip multiprocessors.
Parallel External Memory Algorithm
(PEMA)
Parallel Predictive Entropy Search
(PPES)
We develop parallel predictive entropy search (PPES), a novel algorithm for Bayesian optimization of expensive black-box objective functions. At each iteration, PPES aims to select a batch of points which will maximize the information gain about the global maximizer of the objective. Well known strategies exist for suggesting a single evaluation point based on previous observations, while far fewer are known for selecting batches of points to evaluate in parallel. The few batch selection schemes that have been studied all resort to greedy methods to compute an optimal batch. To the best of our knowledge, PPES is the first non-greedy batch Bayesian optimization strategy. We demonstrate the benefit of this approach in optimization performance on both synthetic and real world applications, including problems in machine learning, rocket science and robotics.
Parallel Sets
(ParSets)
Parallel Sets (ParSets) is a visualization application for categorical data, like census and survey data, inventory, and many other kinds of data that can be summed up in a cross-tabulation. ParSets provide a simple, interactive way to explore and analyze such data.
Parameter Selection and Model Evaluation
(PSME)
Parametric Gaussian Processes
(PGP)
This work introduces the concept of parametric Gaussian processes (PGPs), which is built upon the seemingly self-contradictory idea of making Gaussian processes parametric. Parametric Gaussian processes, by construction, are designed to operate in ‘big data’ regimes where one is interested in quantifying the uncertainty associated with noisy data. The proposed methodology circumvents the well-established need for stochastic variational inference, a scalable algorithm for approximating posterior distributions. The effectiveness of the proposed approach is demonstrated using an illustrative example with simulated data and a benchmark dataset in the airline industry with approximately $6$ million records.
Parametric Model In statistics, a parametric model or parametric family or finite-dimensional model is a family of distributions that can be described using a finite number of parameters. These parameters are usually collected together to form a single k-dimensional parameter vector θ = (θ1, θ2, …, θk). Parametric models are contrasted with the semi-parametric, semi-nonparametric, and non-parametric models, all of which consist of an infinite set of ‘parameters’ for description. The distinction between these four classes is as follows:
• in a ‘parametric’ model all the parameters are in finite-dimensional parameter spaces;
• a model is ‘non-parametric’ if all the parameters are in infinite-dimensional parameter spaces;
• a ‘semi-parametric’ model contains finite-dimensional parameters of interest and infinite-dimensional nuisance parameters;
• a ‘semi-nonparametric’ model has both finite-dimensional and infinite-dimensional unknown parameters of interest.
Some statisticians believe that the concepts ‘parametric’, ‘non-parametric’, and ‘semi-parametric’ are ambiguous. It can also be noted that the set of all probability measures has cardinality of continuum, and therefore it is possible to parametrize any model at all by a single number in (0,1) interval. This difficulty can be avoided by considering only ‘smooth’ parametric models.
Parametric Rectified Linear Unit
(PReLU)
Rectified activation units (rectifiers) are essential for state-of-the-art neural networks. In this work, we study rectifier neural networks for image classification from two aspects. First, we propose a Parametric Rectified Linear Unit (PReLU) that generalizes the traditional rectified unit. PReLU improves model fitting with nearly zero extra computational cost and little overfitting risk. Second, we derive a robust initialization method that particularly considers the rectifier nonlinearities. This method enables us to train extremely deep rectified models directly from scratch and to investigate deeper or wider network architectures. Based on our PReLU networks (PReLU-nets), we achieve 4.94% top-5 test error on the ImageNet 2012 classification dataset. This is a 26% relative improvement over the ILSVRC 2014 winner (GoogLeNet, 6.66%). To our knowledge, our result is the first to surpass human-level performance (5.1%,) on this visual recognition challenge.
Pareto Depth Analysis
(PDA)
We consider the problem of identifying patterns in a data set that exhibit anomalous behavior, often referred to as anomaly detection. Similarity-based anomaly detection algorithms detect abnormally large amounts of similarity or dissimilarity, e.g.~as measured by nearest neighbor Euclidean distances between a test sample and the training samples. In many application domains there may not exist a single dissimilarity measure that captures all possible anomalous patterns. In such cases, multiple dissimilarity measures can be defined, including non-metric measures, and one can test for anomalies by scalarizing using a non-negative linear combination of them. If the relative importance of the different dissimilarity measures are not known in advance, as in many anomaly detection applications, the anomaly detection algorithm may need to be executed multiple times with different choices of weights in the linear combination. In this paper, we propose a method for similarity-based anomaly detection using a novel multi-criteria dissimilarity measure, the Pareto depth. The proposed Pareto depth analysis (PDA) anomaly detection algorithm uses the concept of Pareto optimality to detect anomalies under multiple criteria without having to run an algorithm multiple times with different choices of weights. The proposed PDA approach is provably better than using linear combinations of the criteria and shows superior performance on experiments with synthetic and real data sets.
ParlAI We introduce ParlAI (pronounced ‘par-lay’), an open-source software platform for dialog research implemented in Python, available at http://parl.ai. Its goal is to provide a unified framework for training and testing of dialog models, including multitask training, and integration of Amazon Mechanical Turk for data collection, human evaluation, and online/reinforcement learning. Over 20 tasks are supported in the first release, including popular datasets such as SQuAD, bAbI tasks, MCTest, WikiQA, QACNN, QADailyMail, CBT, bAbI Dialog, Ubuntu, OpenSubtitles and VQA. Included are examples of training neural models with PyTorch and Lua Torch, including both batch and hogwild training of memory networks and attentive LSTMs.
Parle We propose a new algorithm called Parle for parallel training of deep networks that converges 2-4x faster than a data-parallel implementation of SGD, while achieving significantly improved error rates that are nearly state-of-the-art on several benchmarks including CIFAR-10 and CIFAR-100, without introducing any additional hyper-parameters. We exploit the phenomenon of flat minima that has been shown to lead to improved generalization error for deep networks. Parle requires very infrequent communication with the parameter server and instead performs more computation on each client, which makes it well-suited to both single-machine, multi-GPU settings and distributed implementations.
Parrondo’s Paradox Parrondo’s paradox, a paradox in game theory, has been described as: A combination of losing strategies becomes a winning strategy. It is named after its creator, Juan Parrondo, who discovered the paradox in 1996. A more explanatory description is:
‘There exist pairs of games, each with a higher probability of losing than winning, for which it is possible to construct a winning strategy by playing the games alternately.’
Parrondo devised the paradox in connection with his analysis of the Brownian ratchet, a thought experiment about a machine that can purportedly extract energy from random heat motions popularized by physicist Richard Feynman. However, the paradox disappears when rigorously analyzed.
Parseval Networks We introduce Parseval networks, a form of deep neural networks in which the Lipschitz constant of linear, convolutional and aggregation layers is constrained to be smaller than 1. Parseval networks are empirically and theoretically motivated by an analysis of the robustness of the predictions made by deep neural networks when their input is subject to an adversarial perturbation. The most important feature of Parseval networks is to maintain weight matrices of linear and convolutional layers to be (approximately) Parseval tight frames, which are extensions of orthogonal matrices to non-square matrices. We describe how these constraints can be maintained efficiently during SGD. We show that Parseval networks match the state-of-the-art in terms of accuracy on CIFAR-10/100 and Street View House Numbers (SVHN) while being more robust than their vanilla counterpart against adversarial examples. Incidentally, Parseval networks also tend to train faster and make a better usage of the full capacity of the networks.
Part of Speech
(POS)
A part of speech is a category of words (or, more generally, of lexical items) which have similar grammatical properties. Words that are assigned to the same part of speech generally display similar behavior in terms of syntax – they play similar roles within the grammatical structure of sentences – and sometimes in terms of morphology, in that they undergo inflection for similar properties. Commonly listed English parts of speech are noun, verb, adjective, adverb, pronoun, preposition, conjunction, interjection, and sometimes article or determiner. A part of speech – particularly in more modern classifications, which often make more precise distinctions than the traditional scheme does – may also be called a word class, lexical class, or lexical category, although the term lexical category refers in some contexts to a particular type of syntactic category, and may thus exclude parts of speech that are considered to be functional, such as pronouns. The term form class is also used, although this has various conflicting definitions. Word classes may be classified as open or closed: open classes (like nouns, verbs and adjectives) acquire new members constantly, while closed classes (such as pronouns and conjunctions) acquire new members infrequently, if at all. Almost all languages have the word classes noun and verb, but beyond these there are significant variations in different languages. For example, Japanese has as many as three classes of adjectives where English has one; Chinese, Korean and Japanese have a class of nominal classifiers; many languages lack a distinction between adjectives and adverbs, or between adjectives and verbs. This variation in the number of categories and their identifying properties means that analysis needs to be done for each individual language. Nevertheless, the labels for each category are assigned on the basis of universal criteria.
http://…/Stative_verb
Part of Speech Tagging
(POST)
In corpus linguistics, part-of-speech tagging (POS tagging or POST), also called grammatical tagging or word-category disambiguation, is the process of marking up a word in a text (corpus) as corresponding to a particular part of speech, based on both its definition, as well as its context – i.e. relationship with adjacent and related words in a phrase, sentence, or paragraph. A simplified form of this is commonly taught to school-age children, in the identification of words as nouns, verbs, adjectives, adverbs, etc. Once performed by hand, POS tagging is now done in the context of computational linguistics, using algorithms which associate discrete terms, as well as hidden parts of speech, in accordance with a set of descriptive tags. POS-tagging algorithms fall into two distinctive groups: rule-based and stochastic. E. Brill’s tagger, one of the first and most widely used English POS-taggers, employs rule-based algorithms.
Partial AutoCorrelation Function
(PACF)
In time series analysis, the partial autocorrelation function (PACF) plays an important role in data analyses aimed at identifying the extent of the lag in an autoregressive model. The use of this function was introduced as part of the Box-Jenkins approach to time series modelling, where by plotting the partial autocorrelative functions one could determine the appropriate lags p in an AR (p) model or in an extended ARIMA (p,d,q) model.
Partial Dependency Plots Partial dependence plots show the dependence between the target function and a set of ‘target’ features, marginalizing over the values of all other features (the complement features). Due to the limits of human perception the size of the target feature set must be small (usually, one or two) thus the target features are usually chosen among the most important features.
randomForest
Partial Least Squares Regression
(PLS)
Partial least squares regression (PLS regression) is a statistical method that bears some relation to principal components regression; instead of finding hyperplanes of minimum variance between the response and independent variables, it finds a linear regression model by projecting the predicted variables and the observable variables to a new space. Because both the X and Y data are projected to new spaces, the PLS family of methods are known as bilinear factor models. Partial least squares Discriminant Analysis (PLS-DA) is a variant used when the Y is categorical.
PLS think twice about partial least squares
Partial Membership Latent Dirichlet Allocation
(PM-LDA)
For many years, topic models (e.g., pLSA, LDA, SLDA) have been widely used for segmenting and recognizing objects in imagery simultaneously. However, these models are confined to the analysis of categorical data, forcing a visual word to belong to one and only one topic. There are many images in which some regions cannot be assigned a crisp categorical label (e.g., transition regions between a foggy sky and the ground or between sand and water at a beach). In these cases, a visual word is best represented with partial memberships across multiple topics. To address this, we present a partial membership latent Dirichlet allocation (PM-LDA) model and associated parameter estimation algorithms. PM-LDA defines a novel partial membership model for word and document generation. We employ Gibbs sampling for parameter estimation. Experimental results on two natural image datasets and one SONAR image dataset show that PM-LDA can produce both crisp and soft semantic image segmentations; a capability existing methods do not have.
Partial Robust M Regression If an appropriate
weighting scheme is chosen, partial M-estimators become entirely robust to any type of
outlying points, and are called Partial Robust M-estimators. It is shown that partial robust
M-regression outperforms existing methods for robust PLS regression in terms of statistical
precision and computational speed, while keeping good robustness properties.
sprm
Partially Linear Additive Quantile Regression plaqr
Partially Observable Markov Decision Process A partially observable Markov decision process (POMDP) is a generalization of a Markov decision process (MDP). A POMDP models an agent decision process in which it is assumed that the system dynamics are determined by an MDP, but the agent cannot directly observe the underlying state. Instead, it must maintain a probability distribution over the set of possible states, based on a set of observations and observation probabilities, and the underlying MDP. The POMDP framework is general enough to model a variety of real-world sequential decision processes. Applications include robot navigation problems, machine maintenance, and planning under uncertainty in general. The framework originated in the operations research community, and was later adapted by the artificial intelligence and automated planning communities. An exact solution to a POMDP yields the optimal action for each possible belief over the world states. The optimal action maximizes (or minimizes) the expected reward (or cost) of the agent over a possibly infinite horizon. The sequence of optimal actions is known as the optimal policy of the agent for interacting with its environment.
Partially Observed Markov Decision Process
(POMDP)
“Partially Observable Markov Decision Process”
Partially Observed Markov Process
(POMP)
“Hidden Markov Model”
pomp
Participatory Sensing Participatory Sensing is the concept of communities (or other groups of people) contributing sensory information to form a body of knowledge. A growth in mobile devices, such as the iPhone, which has multiple sensors, has made participatory sensing viable in the large-scale. Participatory sensing can be used to retrieve information about the environment, weather, congestion as well as any other sensory information that collectively forms knowledge. Such open communication systems could pose challenges to the veracity of transmitted information. Individual sensors may require a trusted platform or hierarchical trust structures. Additional challenges include, but are not limited to, effective incentives for participation, security, reputation and privacy.
Particle Filter Particle filters or Sequential Monte Carlo (SMC) methods are a set of on-line posterior density estimation algorithms that estimate the posterior density of the state-space by directly implementing the Bayesian recursion equations. The term ‘sequential Monte Carlo’ was first coined in Liu and Chen (1998). SMC methods use a sampling approach, with a set of particles to represent the posterior density. The state-space model can be non-linear and the initial state and noise distributions can take any form required. SMC methods provide a well-established methodology for generating samples from the required distribution without requiring assumptions about the state-space model or the state distributions. However, these methods do not perform well when applied to high-dimensional systems. SMC methods implement the Bayesian recursion equations directly by using an ensemble based approach. The samples from the distribution are represented by a set of particles; each particle has a weight assigned to it that represents the probability of that particle being sampled from the probability density function. Weight disparity leading to weight collapse is a common issue encountered in these filtering algorithms; however it can be mitigated by including a resampling step before the weights become too uneven. In the resampling step, the particles with negligible weights are replaced by new particles in the proximity of the particles with higher weights.
http://…/particle-filtering.pdf
Partitional Clustering Partitional clustering decomposes a data set into a set of disjoint clusters. Given a data set of N points, a partitioning method constructs K (N ≥ K) partitions of the data, with each partition representing a cluster. That is, it classifies the data into K groups by satisfying the following requirements:
(1) each group contains at least one point, and
(2) each point belongs to exactly one group. Notice that for fuzzy partitioning, a point can belong to more than one group.
Many partitional clustering algorithms try to minimize an objective function.
Partitioning Around Medoids
(PAM)
The PAM algorithm was developed by Leonard Kaufman and Peter J. Rousseeuw, and this algorithm is very similar to K-means, mostly because both are partitional algorithms, in other words, both break the datasets into groups, and both works trying to minimize the error, but PAM works with Medoids, that are an entity of the dataset that represent the group in which it is inserted, and K-means works with Centroids, that are artificially created entity that represent its cluster.
The PAM algorithm partitionates a dataset of n objects into a number k of clusters, where both the dataset and the number k is an input of the algorithm. This algorithm works with a matrix of dissimilarity, where its goal is to minimize the overall dissimilarity between the representants of each cluster and its members.
Parzen-Rosenblatt Kernel Density Estimation The Parzen-window method (also known as Parzen-Rosenblatt window method) is a widely used non-parametric approach to estimate a probability density function p(x) for a specific point p(x) from a sample p(xn) that doesn’t require any knowledge or assumption about the underlying distribution.
Parzen-Rosenblatt Window Technique A non-parametric kernel density estimation technique for probability densities of random variables if the underlying distribution/model is unknown. A so-called window function is used to count samples within hypercubes or Gaussian kernels of a specified volume to estimate the probability density.
Passing Bablok Regression The comparison of methods experiment is important part in process of analytical methods and instruments validation. Passing and Bablok regression analysis is a statistical procedure that allows valuable estimation of analytical methods agreement and possible systematic bias between them. It is robust, non-parametric, non sensitive to distribution of errors and data outliers. Assumptions for proper application of Passing and Bablok regression are continuously distributed data and linear relationship between data measured by two analytical methods. Results are presented with scatter diagram and regression line, and regression equation where intercept represents constant and slope proportional measurement error. Confidence intervals of 95% of intercept and slope explain if their value differ from value zero (intercept) and value one (slope) only by chance, allowing conclusion of method agreement and correction action if necessary. Residual plot revealed outliers and identify possible non-linearity. Furthermore, cumulative sum linearity test is performed to investigate possible significant deviation from linearity between two sets of data. Non linear samples are not suitable for concluding on method agreement.
deming
Passive and Partially Active
(PPA)
Fault-tolerance techniques for stream processing engines can be categorized into passive and active approaches. A typical passive approach periodically checkpoints a processing task’s runtime states and can recover a failed task by restoring its runtime state using its latest checkpoint. On the other hand, an active approach usually employs backup nodes to run replicated tasks. Upon failure, the active replica can take over the processing of the failed task with minimal latency. However, both approaches have their own inadequacies in Massively Parallel Stream Processing Engines (MPSPE). The passive approach incurs a long recovery latency especially when a number of correlated nodes fail simultaneously, while the active approach requires extra replication resources. In this paper, we propose a new fault-tolerance framework, which is Passive and Partially Active (PPA). In a PPA scheme, the passive approach is applied to all tasks while only a selected set of tasks will be actively replicated. The number of actively replicated tasks depends on the available resources. If tasks without active replicas fail, tentative outputs will be generated before the completion of the recovery process. We also propose effective and efficient algorithms to optimize a partially active replication plan to maximize the quality of tentative outputs. We implemented PPA on top of Storm, an open-source MPSPE and conducted extensive experiments using both real and synthetic datasets to verify the effectiveness of our approach.
Passive-Aggressive Learning
(PA)
We present a unified view for online classification, regression, and uniclass problems. This view leads to a single algorithmic framework for the three problems. We prove worst case loss bounds for various algorithms for both the realizable case and the non-realizable case. A conversion of our main online algorithm to the setting of batch learning is also discussed. The end result is new algorithms and accompanying loss bounds for the hinge-loss.
PatchNet The ability to visually understand and interpret learned features from complex predictive models is crucial for their acceptance in sensitive areas such as health care. To move closer to this goal of truly interpretable complex models, we present PatchNet, a network that restricts global context for image classification tasks in order to easily provide visual representations of learned texture features on a predetermined local scale. We demonstrate how PatchNet provides visual heatmap representations of the learned features, and we mathematically analyze the behavior of the network during convergence. We also present a version of PatchNet that is particularly well suited for lowering false positive rates in image classification tasks. We apply PatchNet to the classification of textures from the Describable Textures Dataset and to the ISBI-ISIC 2016 melanoma classification challenge.
Path Analysis In statistics, path analysis is used to describe the directed dependencies among a set of variables. This includes models equivalent to any form of multiple regression analysis, factor analysis, canonical correlation analysis, discriminant analysis, as well as more general families of models in the multivariate analysis of variance and covariance analyses (MANOVA, ANOVA, ANCOVA). In addition to being thought of as a form of multiple regression focusing on causality, path analysis can be viewed as a special case of structural equation modeling (SEM) – one in which only single indicators are employed for each of the variables in the causal model. That is, path analysis is SEM with a structural model, but no measurement model. Other terms used to refer to path analysis include causal modeling, analysis of covariance structures, and latent variable models.
Path Modeling Segmentation Tree
(PATHMOX)
One of the main issues within path modeling techniques, especially in business and marketing applications, concerns the identification of different segments in the model population. The approach proposed by the authors consists of building a path models tree having a decision tree-like structure by means of the PATHMOX (Path Modeling Segmentation Tree) algorithm. This algorithm is specifically designed when prior information in form of external variables (such as socio-demographic variables) is available. Inner models are compared using an extension for testing the equality of two regression models; and outer models are compared by means of a Ryan-Joiner correlation test.
genpathmox
PathNet For artificial general intelligence (AGI) it would be efficient if multiple users trained the same giant neural network, permitting parameter reuse, without catastrophic forgetting. PathNet is a first step in this direction. It is a neural network algorithm that uses agents embedded in the neural network whose task is to discover which parts of the network to re-use for new tasks. Agents are pathways (views) through the network which determine the subset of parameters that are used and updated by the forwards and backwards passes of the backpropogation algorithm. During learning, a tournament selection genetic algorithm is used to select pathways through the neural network for replication and mutation. Pathway fitness is the performance of that pathway measured according to a cost function. We demonstrate successful transfer learning; fixing the parameters along a path learned on task A and re-evolving a new population of paths for task B, allows task B to be learned faster than it could be learned from scratch or after fine-tuning. Paths evolved on task B re-use parts of the optimal path evolved on task A. Positive transfer was demonstrated for binary MNIST, CIFAR, and SVHN supervised learning classification tasks, and a set of Atari and Labyrinth reinforcement learning tasks, suggesting PathNets have general applicability for neural network training. Finally, PathNet also significantly improves the robustness to hyperparameter choices of a parallel asynchronous reinforcement learning algorithm (A3C).
Pathwise Calibrated Sparse Shooting Algorithm
(PICASSO)
A family of efficient algorithms, called PathwIse CalibrAted Sparse Shooting AlgOrithm, for a variety of sparse learning problems, including Sparse Linear Regression, Sparse Logistic Regression, Sparse Column Inverse Operator and Sparse Multivariate Regression. Different types of active set identification schemes are implemented, such as cyclic search, greedy search, stochastic search and proximal gradient search. Besides, the package provides the choices between convex (L1 norm) and non-convex (MCP and SCAD) regularizations. Moreover, group regularization for Sparse Linear Regression and Sparse Logistic Regression are also implemented.
picasso
Patient Rule Induction Method
(PRIM)
PRIM (Patient Rule Induction Method) is a data mining technique introduced by Friedman and Fisher (1999). Its objective is to find subregions in the input space with relatively high (low) values for the target variable. By construction, PRIM directly targets these regions rather than indirectly through the estimation of a regression function. The method is such that these subregions can be described by simple rules, as the subregions are (unions of) rectangles in the input space. There are many practical problems where finding such rectangular subregions with relatively high (low) values of the target variable is of considerable interest. Often these are problems where a decision maker wants to choose the values or ranges of the input variables so as to optimize the value of the target variable. Such types of applications can be found in the fields of medical research, financial risk analysis, and social sciences, and PRIM has been applied to these fields. While PRIM enjoys some popularity, and even several modifications have been proposed (see Becker and Fahrmeier, 2001, Cole, Galic and Zack, 2003, Leblanc et al, 2003, Nannings et al. (2008), Wu and Chipman, 2003, and Wang et al, 2004), there is according to our knowledge no thorough study of its basic statistical properties.
PRIMsrc,prim
Pattern Classification The usage of patterns in datasets to discriminate between classes, i.e., to assign a class label to a new observation based on inference.
Pattern Sequence based Forecasting
(PSF)
This paper discusses about PSF, an R package for Pattern Sequence based Forecasting (PSF) algorithm used for univariate time series future prediction. The PSF algorithm consists of two major parts: clustering and prediction techniques. Clustering part includes selection of cluster size and then labeling of time series data with reference to various clusters. Whereas, the prediction part include functions like optimum window size selection for specific patterns and prediction of future values with reference to past pattern sequences. The PSF package consists of various functions to implement PSF algorithm. It also contains a function, which automates all other functions to obtain optimum prediction results. The aim of this package is to promote PSF algorithm and to ease its implementation with minimum efforts. This paper describe all the functions in PSF package with their syntax and simple examples. Finally, the usefulness of this package is discussed by comparing it with auto.arima, a well known time series forecasting function available on CRAN repository.
PSF
Pattern Theory Pattern theory, formulated by Ulf Grenander, is a mathematical formalism to describe knowledge of the world as patterns. It differs from other approaches to artificial intelligence in that it does not begin by prescribing algorithms and machinery to recognize and classify patterns; rather, it prescribes a vocabulary to articulate and recast the pattern concepts in precise language. In addition to the new algebraic vocabulary, its statistical approach was novel in its aim to:
• Identify the hidden variables of a data set using real world data rather than artificial stimuli, which was commonplace at the time.
• Formulate prior distributions for hidden variables and models for the observed variables that form the vertices of a Gibbs-like graph.
• Study the randomness and variability of these graphs.
• Create the basic classes of stochastic models applied by listing the deformations of the patterns.
• Synthesize (sample) from the models, not just analyze signals with it.
Broad in its mathematical coverage, Pattern Theory spans algebra and statistics, as well as local topological and global entropic properties.
PatternNet Visual patterns represent the discernible regularity in the visual world. They capture the essential nature of visual objects or scenes. Understanding and modeling visual patterns is a fundamental problem in visual recognition that has wide ranging applications. In this paper, we study the problem of visual pattern mining and propose a novel deep neural network architecture called PatternNet for discovering these patterns that are both discriminative and representative. The proposed PatternNet leverages the filters in the last convolution layer of a convolutional neural network to find locally consistent visual patches, and by combining these filters we can effectively discover unique visual patterns. In addition, PatternNet can discover visual patterns efficiently without performing expensive image patch sampling, and this advantage provides an order of magnitude speedup compared to most other approaches. We evaluate the proposed PatternNet subjectively by showing randomly selected visual patterns which are discovered by our method and quantitatively by performing image classification with the identified visual patterns and comparing our performance with the current state-of-the-art. We also directly evaluate the quality of the discovered visual patterns by leveraging the identified patterns as proposed objects in an image and compare with other relevant methods. Our proposed network and procedure, PatterNet, is able to outperform competing methods for the tasks described.
PC Algorithm An algorithm that has the same input/output relations as the SGS procedure for faithful distributions but which for sparse graphs does not require the testing of higher order independence relations in the discrete case, and in any case requires testing as few d-separation relations as possible. The procedure starts by forming the complete undirected graph, then ‘thins’ that graph by removing edges with zero order conditional independence relations, thins again with first order conditional independence relations, and so on. The set of variables conditioned on need only be a subset of the set of variables adjacent to one or the other of the variables conditioned.
http://…/41_paper.pdf
CausalFX
Penalized Adaptive Weighted Least Squares Regression
(PWLS)
To conduct regression analysis for data contaminated with outliers, many approaches have been proposed for simultaneous outlier detection and robust regression, so is the approach proposed in this manuscript. This new approach is called “penalized weighted least squares” (PWLS). By assigning each observation an individual weight and incorporating a lasso-type penalty on the log-transformation of the weight vector, the PWLS is able to perform outlier detection and robust regression simultaneously. A Bayesian point-of-view of the PWLS is provided, and it is showed that the PWLS can be seen as an example of Mestimation. Two methods are developed for selecting the tuning parameter in the PWLS. The performance of the PWLS is demonstrated via simulations and real applications.
pawls
Percentages of Maximum Deviation from Independence
(PEM)
GDAtools
Perception Perception (from the Latin perceptio, percipio) is the organization, identification, and interpretation of sensory information in order to represent and understand the environment.
Performance Analytics Decision Support Framework
(PADS)
The PADS (Performance Analytics Decision Support) Framework represents a more strategic approach to linking next-generation performance management and big data analytics technologies. The twin missions of the PADS Framework are to:
1. facilitate communication and collaboration among IT and business teams to proactively anticipate, identify and resolve application performance problems by focusing on user experience across the entire application delivery chain; and,
2. enable IT to orchestrate and manage internally and externally sourced services efficiently to improve decision-making and business outcomes.
The PADS Framework can help companies ensure employee engagement and increase customer satisfaction and loyalty to drive higher operating results and market valuation.
Permutation Distribution Clustering pdc
Permutation Tests A permutation test (also called a randomization test, re-randomization test, or an exact test) is a type of statistical significance test in which the distribution of the test statistic under the null hypothesis is obtained by calculating all possible values of the test statistic under rearrangements of the labels on the observed data points. In other words, the method by which treatments are allocated to subjects in an experimental design is mirrored in the analysis of that design. If the labels are exchangeable under the null hypothesis, then the resulting tests yield exact significance levels; see also exchangeability. Confidence intervals can then be derived from the tests.
Perpetual Learning Machine Despite the promise of brain-inspired machine learning, deep neural networks (DNN) have frustratingly failed to bridge the deceptively large gap between learning and memory. Here, we introduce a Perpetual Learning Machine; a new type of DNN that is capable of brain-like dynamic ‘on the fly’ learning because it exists in a self-supervised state of Perpetual Stochastic Gradient Descent. Thus, we provide the means to unify learning and memory within a machine learning framework.
Perplexity In information theory, perplexity is a measurement of how well a probability distribution or probability model predicts a sample. It may be used to compare probability models.
Persistence Diagrams Persistence diagrams have been widely recognized as a compact descriptor for characterizing multiscale topological features in data. When many datasets are available, statistical features embedded in those persistence diagrams can be extracted by applying machine learnings. In particular, the ability for explicitly analyzing the inverse in the original data space from those statistical features of persistence diagrams is significantly important for practical applications.
Personally Identifiable Information
(PII)
Personally identifiable information (PII), or Sensitive Personal Information (SPI), as used in US privacy law and information security, is information that can be used on its own or with other information to identify, contact, or locate a single person, or to identify an individual in context. The abbreviation PII is widely accepted in the US context, but the phrase it abbreviates has four common variants based on personal / personally, and identifiable / identifying. Not all are equivalent, and for legal purposes the effective definitions vary depending on the jurisdiction and the purposes for which the term is being used. (In other countries with privacy protection laws derived from the OECD privacy principles, the term used is more often ‘personal information’, which may be somewhat broader: in Australia’s Privacy Act 1988 (Cth) ‘personal information’ also includes information from which the person’s identity is ‘reasonably ascertainable’, potentially covering some information not covered by PII.) NIST Special Publication 800-122 defines PII as ‘any information about an individual maintained by an agency, including (1) any information that can be used to distinguish or trace an individual‘s identity, such as name, social security number, date and place of birth, mother‘s maiden name, or biometric records; and (2) any other information that is linked or linkable to an individual, such as medical, educational, financial, and employment information.’ So, for example, a user’s IP address as used in a communication exchange is classed as PII regardless of whether it may or may not on its own be able to uniquely identify a person. Although the concept of PII is old, it has become much more important as information technology and the Internet have made it easier to collect PII through breaches of Internet security, network security and web browser security, leading to a profitable market in collecting and reselling PII. PII can also be exploited by criminals to stalk or steal the identity of a person, or to aid in the planning of criminal acts. As a response to these threats, many website privacy policies specifically address the gathering of PII, and lawmakers have enacted a series of legislations to limit the distribution and accessibility of PII. However, PII is a legal concept, not a technical concept. Because of the versatility and power of modern re-identification algorithms, the absence of PII data does not mean that the remaining data does not identify individuals. While some attributes may be uniquely identifying on their own, any attribute can be identifying in combination with others. These attributes have been referred to as quasi-identifiers or pseudo-identifiers.
anonymizer,generator,detector
Pervasive Analytics During eras of global economic shifts, there was always a key resource discovered that became the spark of transformation for groups of individuals that could effectively harness it. Today, that resource is data. In no uncertain terms, we are witnessing a global data rush and leading companies realize that data will grow enterprise over the next several decades as much as any capital asset. These forward-looking companies realize that to be successful, enterprises must leverage analytics in order to create a more predictable and valuable organization. In some cases they must package data in a way that adds value and informs employees, or their customers, by deploying analytics into decisions making processes everywhere. This idea is referred to as pervasive analytics. But to drive a pervasive analytics strategy and win the data rush, successful companies also recognize the need to transform the way they think about data management and processes in order to unlock the true value of data.
Pervasive Computing The idea that technology is moving beyond the personal computer to everyday devices with embedded technology and connectivity as computing devices become progressively smaller and more powerful. Also called ubiquitous computing, pervasive computing is the result of computer technology advancing at exponential speeds — a trend toward all man-made and some natural products having hardware and software. Pervasive computing goes beyond the realm of personal computers: it is the idea that almost any device, from clothing to tools to appliances to cars to homes to the human body to your coffee mug, can be imbedded with chips to connect the device to an infinite network of other devices. The goal of pervasive computing, which combines current network technologies with wireless computing, voice recognition, Internet capability and artificial intelligence, is to create an environment where the connectivity of devices is embedded in such a way that the connectivity is unobtrusive and always available.
Phased LSTM Recurrent Neural Networks (RNNs) have become the state-of-the-art choice for extracting patterns from temporal sequences. However, current RNN models are ill-suited to process irregularly sampled data triggered by events generated in continuous time by sensors or other neurons. Such data can occur, for example, when the input comes from novel event-driven artificial sensors that generate sparse, asynchronous streams of events or from multiple conventional sensors with different update intervals. In this work, we introduce the Phased LSTM model, which extends the LSTM unit by adding a new time gate. This gate is controlled by a parametrized oscillation with a frequency range that produces updates of the memory cell only during a small percentage of the cycle. Even with the sparse updates imposed by the oscillation, the Phased LSTM network achieves faster convergence than regular LSTMs on tasks which require learning of long sequences. The model naturally integrates inputs from sensors of arbitrary sampling rates, thereby opening new areas of investigation for processing asynchronous sensory events that carry timing information. It also greatly improves the performance of LSTMs in standard RNN applications, and does so with an order-of-magnitude fewer computes at runtime.
Picasso Picasso is a free open-source (Eclipse Public License) web application written in Python for rendering standard visualizations useful for training convolutional neural networks. Picasso ships with occlusion maps and saliency maps, two visualizations which help reveal issues that evaluation metrics like loss and accuracy might hide: for example, learning a proxy classification task. Picasso works with the Keras and Tensorflow deep learning frameworks. Picasso can be used with minimal configuration by deep learning researchers and engineers alike across various neural network architectures. Adding new visualizations is simple: the user can specify their visualization code and HTML template separately from the application code.
Piecewise-Deterministic Markov Processes
(PDMP)
In probability theory, a piecewise-deterministic Markov process (PDMP) is a process whose behaviour is governed by random jumps at points in time, but whose evolution is deterministically governed by an ordinary differential equation between those times. The class of models is “wide enough to include as special cases virtually all the non-diffusion models of applied probability.” The process is defined by three quantities: the flow, the jump rate, and the transition measure. The model was first introduced in a paper by Mark H. A. Davis in 1984.
EstSimPDMP
Pierre’s Correlogram Rcriticor
Pipeline Pilot Bayesian Classifiers
(PNPBC)
The commercial product “Pipeline Pilot” uses a Naive Bayes statistics based approach, which essentially contrasts the active samples of a target with the whole (background) compound database. It does not explicitly consider the samples labelled as incative. Laplacian-adjusted probability estimates for the features lead to individual feature weights which are finally summed up to give the prediction. We re-implemented the “Pipeline Pilot” Naive Bayes statistics in order to use it on a multi-core supercomputer, which allowed us to compare this method on our benchmark dataset.
Plasticity Plasticity is the ability of a learning algorithm to adapt to new data.
Platt Scaling In machine learning, Platt scaling or Platt calibration is a way of transforming the outputs of a classification model into a probability distribution over classes. The method was invented by John Platt in the context of support vector machines, replacing an earlier method by Vapnik, but can be applied to other classification models. Platt scaling works by fitting a logistic regression model to a classifier’s scores.
Plug and Play Generative Networks
(PPGN)
Generating high-resolution, photo-realistic images has been a long-standing goal in machine learning. Recently, Nguyen et al. (2016) showed one interesting way to synthesize novel images by performing gradient ascent in the latent space of a generator network to maximize the activations of one or multiple neurons in a separate classifier network. In this paper we extend this method by introducing an additional prior on the latent code, improving both sample quality and sample diversity, leading to a state-of-the-art generative model that produces high quality images at higher resolutions (227×227) than previous generative models, and does so for all 1000 ImageNet categories. In addition, we provide a unified probabilistic interpretation of related activation maximization methods and call the general class of models ‘Plug and Play Generative Networks’. PPGNs are composed of 1) a generator network G that is capable of drawing a wide range of image types and 2) a replaceable ‘condition’ network C that tells the generator what to draw. We demonstrate the generation of images conditioned on a class (when C is an ImageNet or MIT Places classification network) and also conditioned on a caption (when C is an image captioning network). Our method also improves the state of the art of Multifaceted Feature Visualization, which generates the set of synthetic inputs that activate a neuron in order to better understand how deep neural networks operate. Finally, we show that our model performs reasonably well at the task of image inpainting. While image models are used in this paper, the approach is modality-agnostic and can be applied to many types of data.
Plus L take away R
(+L-R)
The “Plus L take away R” (+L -R) is basically a combination of SFS and SBS. It append features to the feature subset L-times, and afterwards it removes features R-times until we reach our desired size for the feature subset.
Variant 1: L > R
If L > R, the algorithm starts with an empty feature subset and adds L features to it from the feature space. Then it goes over to the next step 2, where it removes R features from the feature subset, after which it goes back to step 1 to add L features again. Those steps are repeated until the feature subset reaches the desired size k.
Variant 2: R > L
Else, if R > L, the algorithms starts with the whole feature space* as feature subset. It remove sR features from it before it adds back L features from those features that were just removed.
Those steps are repeated until the feature subset reaches the desired size k*.
Point and Figure Chart
(P&F)
Point and figure (P&F) is a charting technique used in technical analysis. Point and figure charting is unique in that it does not plot price against time as all other techniques do. Instead it plots price against changes in direction by plotting a column of Xs as the price rises and a column of Os as the price falls.
rpnf
Point Linking Network
(PLN)
Object detection is a core problem in computer vision. With the development of deep ConvNets, the performance of object detectors has been dramatically improved. The deep ConvNets based object detectors mainly focus on regressing the coordinates of bounding box, \eg, Faster-R-CNN, YOLO and SSD. Different from these methods that considering bounding box as a whole, we propose a novel object bounding box representation using points and links and implemented using deep ConvNets, termed as Point Linking Network (PLN). Specifically, we regress the corner/center points of bounding-box and their links using a fully convolutional network; then we map the corner points and their links back to multiple bounding boxes; finally an object detection result is obtained by fusing the multiple bounding boxes. PLN is naturally robust to object occlusion and flexible to object scale variation and aspect ratio variation. In the experiments, PLN with the Inception-v2 model achieves state-of-the-art single-model and single-scale results on the PASCAL VOC 2007, the PASCAL VOC 2012 and the COCO detection benchmarks without bells and whistles. The source code will be released.
Point Pattern Analysis
(PPA)
Point pattern analysis (PPA) is the study of the spatial arrangements of points in (usually 2-dimensional) space. A fundamental problem of PPA is inferring whether a given arrangement is merely random or the result of some process.
selectspm,stpp
Point Process In statistics and probability theory, a point process is a type of random process for which any one realisation consists of a set of isolated points either in time or geographical space, or in even more general spaces. For example, the occurrence of lightning strikes might be considered as a point process in both time and geographical space if each is recorded according to its location in time and space. Point processes are well studied objects in probability theory and the subject of powerful tools in statistics for modeling and analyzing spatial data, which is of interest in such diverse disciplines as forestry, plant ecology, epidemiology, geography, seismology, materials science, astronomy, telecommunications, computational neuroscience, economics and others. Point processes on the real line form an important special case that is particularly amenable to study, because the different points are ordered in a natural way, and the whole point process can be described completely by the (random) intervals between the points. These point processes are frequently used as models for random events in time, such as the arrival of customers in a queue (queueing theory), of impulses in a neuron (computational neuroscience), particles in a Geiger counter, location of radio stations in a telecommunication network or of searches on the world-wide web.
mmpp
Pointer Network
(Ptr-Net)
We introduce a new neural architecture to learn the conditional probability of an output sequence with elements that are discrete tokens corresponding to positions in an input sequence. Such problems cannot be trivially addressed by existent approaches such as sequence-to-sequence and Neural Turing Machines, because the number of target classes in each step of the output depends on the length of the input, which is variable. Problems such as sorting variable sized sequences, and various combinatorial optimization problems belong to this class. Our model solves the problem of variable size output dictionaries using a recently proposed mechanism of neural attention. It differs from the previous attention attempts in that, instead of using attention to blend hidden units of an encoder to a context vector at each decoder step, it uses attention as a pointer to select a member of the input sequence as the output. We call this architecture a Pointer Net (Ptr-Net). We show Ptr-Nets can be used to learn approximate solutions to three challenging geometric problems — finding planar convex hulls, computing Delaunay triangulations, and the planar Travelling Salesman Problem — using training examples alone. Ptr-Nets not only improve over sequence-to-sequence with input attention, but also allow us to generalize to variable size output dictionaries. We show that the learnt models generalize beyond the maximum lengths they were trained on. We hope our results on these tasks will encourage a broader exploration of neural learning for discrete problems.
Pointer Networks Pointer networks are a variation of the sequence-to-sequence model with attention. Instead of translating one sequence into another, they yield a succession of pointers to the elements of the input series. The most basic use of this is ordering the elements of a variable-length sequence. Basic seq2seq is an LSTM encoder coupled with an LSTM decoder. It’s most often heard of in the context of machine translation: given a sentence in one language, the encoder turns it into a fixed-size representation. Decoder transforms this into a sentence again, possibly of different length than the source. For example, “como estas?” – two words – would be translated to “how are you?” – three words. The model gives better results when augmented with attention. Practically it means that instead of processing the input from start to finish, the decoder can look back and forth over input. Specifically, it has access to encoder states from each step, not just the last one. Consider how it may help with Spanish, in which adjectives go before nouns: “neural network” becomes “red neuronal”. In technical terms, attention (at least this particular kind, content-based attention) boils down to dot products and weighted averages. In short, a weighted average of encoder states becomes the decoder state. Attention is just the distribution of weights.
Poisson Factorization Machine
(PFM)
Newsroom in online ecosystem is difficult to untangle. With prevalence of social media, interactions between journalists and individuals become visible, but lack of understanding to inner processing of information feedback loop in public sphere leave most journalists baffled. Can we provide an organized view to characterize journalist behaviors on individual level to know better of the ecosystem? To this end, I propose Poisson Factorization Machine (PFM), a Bayesian analogue to matrix factorization that assumes Poisson distribution for generative process. The model generalizes recent studies on Poisson Matrix Factorization to account temporal interaction which involves tensor-like structure, and label information. Two inference procedures are designed, one based on batch variational EM and another stochastic variational inference scheme that efficiently scales with data size. An important novelty in this note is that I show how to stack layers of PFM to introduce a deep architecture. This work discusses some potential results applying the model and explains how such latent factors may be useful for analyzing latent behaviors for data exploration.
Poisson Regression In statistics, Poisson regression is a form of regression analysis used to model count data and contingency tables. Poisson regression assumes the response variable Y has a Poisson distribution, and assumes the logarithm of its expected value can be modeled by a linear combination of unknown parameters. A Poisson regression model is sometimes known as a log-linear model, especially when used to model contingency tables.
Polyaxon Deep Learning library for TensorFlow for building end to end models and experiments. Polyaxon was built with the following goals:
• Modularity: The creation of a computation graph based on modular and understandable modules, with the possibility to reuse and share the module in subsequent usage.
• Usability: Training a model should be easy enough, and should enable quick experimentations.
• Configurable: Models and experiments could be created using a YAML/Json file, but also in python files.
• Extensibility: The modularity and the extensive documentation of the code makes it easy to build and extend the set of provided modules.
• Performance: Polyaxon is based on internal tensorflow code base and leverage the builtin distributed learning.
• Data Preprocessing: Polyaxon provides many pipelines and data processor to support different data inputs.
Github
“Tensorflow”
Polyglot Persistence Today, most large companies are using a variety of different data storage technologies for different kinds of data. A lot of companies still use relational databases to store some data, but the persistence needs of applications are evolving from predominantly relational to a mixture of data sources. Polyglot persistence is commonly used to define this hybrid approach. Increasingly, architects are approaching the data storage problem by first figuring out how they want to manipulate the data, and then choosing the appropriate technology to fit their needs. What polyglot persistence boils down to is choice – the ability to leverage multiple data storages, depending on your use cases.
http://…/polyglot-persistence
Polyglot Processing … So here we are. Above observations motivate me to suggest a new term that aims to capture the shift of focus toward processing of the data: polyglot processing – which essentially means using the right processing engine for a given task. To the best of my knowledge no one has suggested or attempted to define this term yet, besides a somewhat related mentioning in the realm of the Apache Bigtop project, however in a much narrower context….
Polyglot Programming Beyond being something incredibly difficult to say many times in a row, polyglot programming is the use of different programming languages, frameworks, services and databases for developing individual applications.
Pool Adjacent Violators Algorithm
(PAVA)
Pool Adjacent Violators Algorithm (PAVA) is a linear time (and linear memory) algorithm for linear ordering isotonic regression.

http://…/deleeuw_hornik_mair_R_09.pdf

Portmanteau Test A portmanteau test is a type of statistical hypothesis test in which the null hypothesis is well specified, but the alternative hypothesis is more loosely specified. Tests constructed in this context can have the property of being at least moderately powerful against a wide range of departures from the null hypothesis. Thus, in applied statistics, a portmanteau test provides a reasonable way of proceeding as a general check of a model’s match to a dataset where there are many different ways in which the model may depart from the underlying data generating process. Use of such tests avoids having to be very specific about the particular type of departure being tested.
Position, Sequence and Set Similarity Measure In this paper the author presents a new similarity measure for strings of characters based on S3M which he expands to take into account not only the characters set and sequence but also their position. After demonstrating the superiority of this new measure and discussing the need for a self adaptive spell checker, this work is further developed into an adaptive spell checker that produces a cluster with a defined number of words for each presented misspelled word. The accuracy of this solution is measured comparing its results against the results of the most widely used spell checker.
Possibilistic C-Means
(PCM)
PCM partitions an m-dimensional dataset Formula into several clusters to describe an underlying structure within the data. A possibilistic partition is defined as a Formula matrix Formula, where Formula is the membership value of object Formula towards the ith cluster …
The Possibilistic C-Means Algorithm: Insights and Recommendations
A Possibilistic Fuzzy c-Means Clustering Algorithm
PCM and APCM Revisited: An Uncertainty Perspective
Posterior Predictive Distribution In statistics, and especially Bayesian statistics, the posterior predictive distribution is the distribution of unobserved observations (prediction) conditional on the observed data. Described as the distribution that a new i.i.d. data point \tilde{x} would have, given a set of N existing i.i.d. observations \mathbf{X} = . In a frequentist context, this might be derived by computing the maximum likelihood estimate (or some other estimate) of the parameter(s) given the observed data, and then plugging them into the distribution function of the new observations.
Posterior Probability In Bayesian statistics, the posterior probability of a random event or an uncertain proposition is the conditional probability that is assigned after the relevant evidence or background is taken into account. Similarly, the posterior probability distribution is the probability distribution of an unknown quantity, treated as a random variable, conditional on the evidence obtained from an experiment or survey. “Posterior”, in this context, means after taking into account the relevant evidence related to the particular case being examined.
Posterior Sampling for Pure Exploration
(PSPE)
In several realistic situations, an interactive learning agent can practice and refine its strategy before going on to be evaluated. For instance, consider a student preparing for a series of tests. She would typically take a few practice tests to know which areas she needs to improve upon. Based of the scores she obtains in these practice tests, she would formulate a strategy for maximizing her scores in the actual tests. We treat this scenario in the context of an agent exploring a fixed-horizon episodic Markov Decision Process (MDP), where the agent can practice on the MDP for some number of episodes (not necessarily known in advance) before starting to incur regret for its actions. During practice, the agent’s goal must be to maximize the probability of following an optimal policy. This is akin to the problem of Pure Exploration (PE). We extend the PE problem of Multi Armed Bandits (MAB) to MDPs and propose a Bayesian algorithm called Posterior Sampling for Pure Exploration (PSPE), which is similar to its bandit counterpart. We show that the Bayesian simple regret converges at an optimal exponential rate when using PSPE. When the agent starts being evaluated, its goal would be to minimize the cumulative regret incurred. This is akin to the problem of Reinforcement Learning (RL). The agent uses the Posterior Sampling for Reinforcement Learning algorithm (PSRL) initialized with the posteriors of the practice phase. We hypothesize that this PSPE + PSRL combination is an optimal strategy for minimizing regret in RL problems with an initial practice phase. We show empirical results which prove that having a lower simple regret at the end of the practice phase results in having lower cumulative regret during evaluation.
Potential Confounding Factor
(PCF)
Power Normal Distribution
(PN)

PowerNormal
Prais-Winsten Estimation In econometrics, Prais-Winsten estimation is a procedure meant to take care of the serial correlation of type AR(1) in a linear model. Conceived by Sigbert Prais and Christopher Winsten in 1954, it is a modification of Cochrane-Orcutt estimation in the sense that it does not lose the first observation and leads to more efficiency as a result.
prais
Preattentive Processing Pre-attentive processing is the unconscious accumulation of information from the environment. All available information is pre-attentively processed. Then, the brain filters and processes what is important. Information that has the highest salience (a stimulus that stands out the most) or relevance to what a person is thinking about is selected for further and more complete analysis by conscious (attentive) processing. Understanding how pre-attentive processing works is useful in advertising, in education, and for prediction of cognitive ability.
Precision In pattern recognition and information retrieval with binary classification, precision (also called positive predictive value) is the fraction of retrieved instances that are relevant, while recall (also known as sensitivity) is the fraction of relevant instances that are retrieved. Both precision and recall are therefore based on an understanding and measure of relevance. Suppose a program for recognizing dogs in scenes from a video identifies 7 dogs in a scene containing 9 dogs and some cats. If 4 of the identifications are correct, but 3 are actually cats, the program’s precision is 4/7 while its recall is 4/9. When a search engine returns 30 pages only 20 of which were relevant while failing to return 40 additional relevant pages, its precision is 20/30 = 2/3 while its recall is 20/60 = 1/3. In statistics, if the null hypothesis is that all and only the relevant items are retrieved, absence of type I and type II errors corresponds respectively to maximum precision (no false positive) and maximum recall (no false negative). The above pattern recognition example contained 7 – 4 = 3 type I errors and 9 – 4 = 5 type II errors. Precision can be seen as a measure of exactness or quality, whereas recall is a measure of completeness or quantity. In simple terms, high precision means that an algorithm returned substantially more relevant results than irrelevant, while high recall means that an algorithm returned most of the relevant results.
Precision and Recall In pattern recognition and information retrieval with binary classification, precision (also called positive predictive value) is the fraction of retrieved instances that are relevant, while recall (also known as sensitivity) is the fraction of relevant instances that are retrieved. Both precision and recall are therefore based on an understanding and measure of relevance. Suppose a program for recognizing dogs in scenes from a video identifies 7 dogs in a scene containing 9 dogs and some cats. If 4 of the identifications are correct, but 3 are actually cats, the program’s precision is 4/7 while its recall is 4/9. When a search engine returns 30 pages only 20 of which were relevant while failing to return 40 additional relevant pages, its precision is 20/30 = 2/3 while its recall is 20/60 = 1/3. In statistics, if the null hypothesis is that all and only the relevant items are retrieved, absence of type I and type II errors corresponds respectively to maximum precision (no false positive) and maximum recall (no false negative). The above pattern recognition example contained 7 – 4 = 3 type I errors and 9 – 4 = 5 type II errors. Precision can be seen as a measure of exactness or quality, whereas recall is a measure of completeness or quantity. In simple terms, high precision means that an algorithm returned substantially more relevant results than irrelevant, while high recall means that an algorithm returned most of the relevant results.
http://…/recallprecision.pdf
Predicted Relevance Model
(PRM)
Evaluation of search engines relies on assessments of search results for selected test queries, from which we would ideally like to draw conclusions in terms of relevance of the results for general (e.g., future, unknown) users. In practice however, most evaluation scenarios only allow us to conclusively determine the relevance towards the particular assessor that provided the judgments. A factor that cannot be ignored when extending conclusions made from assessors towards users, is the possible disagreement on relevance, assuming that a single gold truth label does not exist. This paper presents and analyzes the Predicted Relevance Model (PRM), which allows predicting a particular result’s relevance for a random user, based on an observed assessment and knowledge on the average disagreement between assessors. With the PRM, existing evaluation metrics designed to measure binary assessor relevance, can be transformed into more robust and effectively graded measures that evaluate relevance towards a random user. It also leads to a principled way of quantifying multiple graded or categorical relevance levels for use as gains in established graded relevance measures, such as normalized discounted cumulative gain (nDCG), which nowadays often use heuristic and data-independent gain values. Given a set of test topics with graded relevance judgments, the PRM allows evaluating systems on different scenarios, such as their capability of retrieving top results, or how well they are able to filter out non-relevant ones. Its use in actual evaluation scenarios is illustrated on several information retrieval test collections.
Prediction Advantage
(PA)
We introduce the Prediction Advantage (PA), a novel performance measure for prediction functions under any loss function (e.g., classification or regression). The PA is defined as the performance advantage relative to the Bayesian risk restricted to knowing only the distribution of the labels. We derive the PA for well-known loss functions, including 0/1 loss, cross-entropy loss, absolute loss, and squared loss. In the latter case, the PA is identical to the well-known R-squared measure, widely used in statistics. The use of the PA ensures meaningful quantification of prediction performance, which is not guaranteed, for example, when dealing with noisy imbalanced classification problems. We argue that among several known alternative performance measures, PA is the best (and only) quantity ensuring meaningfulness for all noise and imbalance levels.
Prediction Difference Analysis This article presents the prediction difference analysis method for visualizing the response of a deep neural network to a specific input. When classifying images, the method highlights areas in a given input image that provide evidence for or against a certain class. It overcomes several shortcoming of previous methods and provides great additional insight into the decision making process of classifiers. Making neural network decisions interpretable through visualization is important both to improve models and to accelerate the adoption of black-box classifiers in application areas such as medicine. We illustrate the method in experiments on natural images (ImageNet data), as well as medical images (MRI brain scans).
PredictionIO PredictionIO is an open source machine learning server for software developers to create predictive features, such as personalization, recommendation and content discovery.
Prediction-Performance-Plot ROCR
Predictive Analysis Library
(PAL)
The Predictive Analysis Library (PAL) defines functions that can be called from within SQLScript procedures to perform analytic algorithms. This release of PAL includes classic and universal predictive analysis algorithms in eight data-mining categories:
• Clustering
• Classification
• Association
• Time Series
• Preprocessing
• Statistics
• Social Network Analysis
• Miscellaneous
Predictive Analytics / Predictive Analysis
(PA)
Predictive analytics encompasses a variety of statistical techniques from modeling, machine learning, and data mining that analyze current and historical facts to make predictions about future, or otherwise unknown, events.
In business, predictive models exploit patterns found in historical and transactional data to identify risks and opportunities. Models capture relationships among many factors to allow assessment of risk or potential associated with a particular set of conditions, guiding decision making for candidate transactions.
Predictive analytics is used in actuarial science, marketing, financial services, insurance, telecommunications, retail, travel, healthcare, pharmaceuticals and other fields.
One of the most well known applications is credit scoring, which is used throughout financial services. Scoring models process a customer’s credit history, loan application, customer data, etc., in order to rank-order individuals by their likelihood of making future credit payments on time. A well-known example is FICO
Predictive Maintenance
(PdM)
Predictive maintenance (PdM) techniques are designed to help determine the condition of in-service equipment in order to predict when maintenance should be performed. This approach promises cost savings over routine or time-based preventive maintenance, because tasks are performed only when warranted. The main promise of Predicted Maintenance is to allow convenient scheduling of corrective maintenance, and to prevent unexpected equipment failures. The key is ‘the right information in the right time’. By knowing which equipment needs maintenance, maintenance work can be better planned (spare parts, people, etc.) and what would have been ‘unplanned stops’ are transformed to shorter and fewer ‘planned stops’, thus increasing plant availability. Other potential advantages include increased equipment lifetime, increased plant safety, fewer accidents with negative impact on environment, and optimized spare parts handling.
Predictive Model Markup Language
(PMML)
The Predictive Model Markup Language (PMML) is an XML-based file format developed by the Data Mining Group to provide a way for applications to describe and exchange models produced by data mining and machine learning algorithms. It supports common models such as logistic regression and feedforward neural networks. Since PMML is an XML-based standard, the specification comes in the form of an XML schema.
http://…/pmml-revolution.html
Predictive Personalization Predictive personalization is defined as the ability to predict customer behavior, needs or wants – and tailor offers and communications very precisely. Social data is one source of providing this predictive analysis, particularly social data that is structured. Predictive personalization is a much more recent means of personalization and can be used well to augment current personalization offerings.
Predictive State Recurrent Neural Networks
(PSRNN)
We present a new model, called Predictive State Recurrent Neural Networks (PSRNNs), for filtering and prediction in dynamical systems. PSRNNs draw on insights from both Recurrent Neural Networks (RNNs) and Predictive State Representations (PSRs), and inherit advantages from both types of models. Like many successful RNN architectures, PSRNNs use (potentially deeply composed) bilinear transfer functions to combine information from multiple sources, so that one source can act as a gate for another. These bilinear functions arise naturally from the connection to state updates in Bayes filters like PSRs, in which observations can be viewed as gating belief states. We show that PSRNNs can be learned effectively by combining backpropogation through time (BPTT) with an initialization based on a statistically consistent learning algorithm for PSRs called two-stage regression (2SR). We also show that PSRNNs can be can be factorized using tensor decomposition, reducing model size and suggesting interesting theoretical connections to existing multiplicative architectures such as LSTMs. We applied PSRNNs to 4 datasets, and showed that we outperform several popular alternative approaches to modeling dynamical systems in all cases.
Predictive State Representation
(PSR)
In computer science, a predictive state representation (PSR) is a way to model a state of controlled dynamical system from a history of actions taken and resulting observations. PSR captures the state of a system as a vector of predictions for future tests (experiments) that can be done on the system. A test is a sequence of action-observation pairs and its prediction is the probability of the test’s observation- sequence happening if the test’s action-sequence were to be executed on the system. One of the advantage of using PSR is that the predictions are directly related to observable quantities. This is in contrast to other models of dynamical systems, such as partially observable Markov decision processes (POMDPs) where the state of the system is represented as a probability distribution over unobserved nominal states.
Predictron One of the key challenges of artificial intelligence is to learn models that are effective in the context of planning. In this document we introduce the predictron architecture. The predictron consists of a fully abstract model, represented by a Markov reward process, that can be rolled forward multiple ‘imagined’ planning steps. Each forward pass of the predictron accumulates internal rewards and values over multiple planning depths. The predictron is trained end-to-end so as to make these accumulated values accurately approximate the true value function. We applied the predictron to procedurally generated random mazes and a simulator for the game of pool. The predictron yielded significantly more accurate predictions than conventional deep neural network architectures.
Preference Mapping Preference Mapping allows to build maps which are useful in a variety of domains. A preference map is a decision support tool in analyses where a configuration of objects has been obtained from a first analysis (PCA, MCA, MDS), and where a table with complementary data describing the objects is available (attributes or preference data). There are two types of preference mapping methods:
1.External preference mapping or PREFMAP
2.Internal preference mapping
SensoMineR
Preferential Attachment
(PA)
A preferential attachment process is any of a class of processes in which some quantity, typically some form of wealth or credit, is distributed among a number of individuals or objects according to how much they already have, so that those who are already wealthy receive more than those who are not. ‘Preferential attachment’ is only the most recent of many names that have been given to such processes. They are also referred to under the names ‘Yule process’, ‘cumulative advantage’, ‘the rich get richer’, and, less correctly, the ‘Matthew effect’. They are also related to Gibrat’s law. The principal reason for scientific interest in preferential attachment is that it can, under suitable circumstances, generate power law distributions.
Prescriptive Analytics Prescriptive analytics not only anticipates what will happen and when it will happen, but also why it will happen. Further, prescriptive analytics suggests decision options on how to take advantage of a future opportunity or mitigate a future risk and shows the implication of each decision option. Prescriptive analytics can continually take in new data to re-predict and re-prescribe, thus automatically improving prediction accuracy and prescribing better decision options. Prescriptive analytics ingests hybrid data, a combination of structured (numbers, categories) and unstructured data (videos, images, sounds, texts), and business rules to predict what lies ahead and to prescribe how to take advantage of this predicted future without compromising other priorities.
PRESS Nonlinear models are frequently applied to determine the optimal supply natural gas to a given residential unit based on economical and technical factors, or used to fit biochemical and pharmaceutical assay nonlinear data. In this article we propose PRESS statistics and prediction coefficients for a class of nonlinear beta regression models, namely $P^2$ statistics. We aim at using both prediction coefficients and goodness-of-fit measures as a scheme of model select criteria. In this sense, we introduce for beta regression models under nonlinearity the use of the model selection criteria based on robust pseudo-$R^2$ statistics. Monte Carlo simulation results on the finite sample behavior of both prediction-based model selection criteria $P^2$ and the pseudo-$R^2$ statistics are provided. Three applications for real data are presented. The linear application relates to the distribution of natural gas for home usage in S\~ao Paulo, Brazil. Faced with the economic risk of too overestimate or to underestimate the distribution of gas has been necessary to construct prediction limits and to select the best predicted and fitted model to construct best prediction limits it is the aim of the first application. Additionally, the two nonlinear applications presented also highlight the importance of considering both goodness-of-predictive and goodness-of-fit of the competitive models.
Pretty Quick Version of R
(pqR)
pqR is a new version of the R interpreter. It is based on R-2.15.0, distributed by the R Core Team (at r-project.org), but improves on it in many ways, mostly ways that speed it up, but also by implementing some new features and fixing some bugs. pqR is an open-source project licensed under the GPL. One notable improvement in pqR is that it is able to do some numeric computations in parallel with each other, and with other operations of the interpreter, on systems with multiple processors or processor cores.
Price of Fairness
(PoF)
We introduce a flexible family of fairness regularizers for (linear and logistic) regression problems. These regularizers all enjoy convexity, permitting fast optimization, and they span the rang from notions of group fairness to strong individual fairness. By varying the weight on the fairness regularizer, we can compute the efficient frontier of the accuracy-fairness trade-off on any given dataset, and we measure the severity of this trade-off via a numerical quantity we call the Price of Fairness (PoF). The centerpiece of our results is an extensive comparative study of the PoF across six different datasets in which fairness is a primary consideration.
Primal-Dual Active-Set
(PDAS)
Isotonic regression (IR) is a non-parametric calibration method used in supervised learning. For performing large-scale IR, we propose a primal-dual active-set (PDAS) algorithm which, in contrast to the state-of-the-art Pool Adjacent Violators (PAV) algorithm, can be parallized and is easily warm-started thus well-suited in the online settings. We prove that, like the PAV algorithm, our PDAS algorithm for IR is convergent and has a work complexity of O(n), though our numerical experiments suggest that our PDAS algorithm is often faster than PAV. In addition, we propose PDAS variants (with safeguarding to ensure convergence) for solving related trend filtering (TF) problems, providing the results of experiments to illustrate their effectiveness.
Primal-Dual Group Convolutional Neural Networks
(PDGCNets)
In this paper, we present a simple and modularized neural network architecture, named primal-dual group convolutional neural networks (PDGCNets). The main point lies in a novel building block, a pair of two successive group convolutions: primal group convolution and dual group convolution. The two group convolutions are complementary: (i) the convolution on each primal partition in primal group convolution is a spatial convolution, while on each dual partition in dual group convolution, the convolution is a point-wise convolution; (ii) the channels in the same dual partition come from different primal partitions. We discuss one representative advantage: Wider than a regular convolution with the number of parameters and the computation complexity preserved. We also show that regular convolutions, group convolution with summation fusion (as used in ResNeXt), and the Xception block are special cases of primal-dual group convolutions. Empirical results over standard benchmarks, CIFAR-$10$, CIFAR-$100$, SVHN and ImageNet demonstrate that our networks are more efficient in using parameters and computation complexity with similar or higher accuracy.
Prim’s Algorithm In computer science, Prim’s algorithm is a greedy algorithm that finds a minimum spanning tree for a connected weighted undirected graph. This means it finds a subset of the edges that forms a tree that includes every vertex, where the total weight of all the edges in the tree is minimized. The algorithm was developed in 1930 by Czech mathematician Vojtěch Jarník and later independently by computer scientist Robert C. Prim in 1957 and rediscovered by Edsger Dijkstra in 1959. Therefore it is also sometimes called the DJP algorithm, the Jarník algorithm, or the Prim-Jarník algorithm. Other algorithms for this problem include Kruskal’s algorithm and Borůvka’s algorithm. These algorithms find the minimum spanning forest in a possibly disconnected graph. By running Prim’s algorithm for each connected component of the graph, it can also be used to find the minimum spanning forest.
Principal Component Analysis
(PCA)
Principal component analysis (PCA) is a statistical procedure that uses orthogonal transformation to convert a set of observations of possibly correlated variables into a set of values of linearly uncorrelated variables called principal components. The number of principal components is less than or equal to the number of original variables. This transformation is defined in such a way that the first principal component has the largest possible variance (that is, accounts for as much of the variability in the data as possible), and each succeeding component in turn has the highest variance possible under the constraint that it is orthogonal to (i.e., uncorrelated with) the preceding components. Principal components are guaranteed to be independent if the data set is jointly normally distributed. PCA is sensitive to the relative scaling of the original variables.

http://…roper-applications-of-principal-component
pcaBootPlot,idm,rpca

Principal Component Pursuit
(PCP)
see section 1.2
“Robust Principal Component Analysis”
Principal Covariates Regression
(PCovR)
A method for multivariate regression is proposed that is based on the simultaneous least-squares minimization of Y residuals and X residuals by a number of orthogonal X components. By lending increasing weight to the X variables relative to the Y variables, the procedure moves from ordinary least-squares regression to principal component regression, forming a relatively simple alternative for continuum regression.
PCovR
Principal Differences Analysis
(PDA)
We introduce principal differences analysis (PDA) for analyzing differences between high-dimensional distributions. The method operates by finding the projection that maximizes the Wasserstein divergence between the resulting univariate populations. Relying on the Cramer-Wold device, it requires no assumptions about the form of the underlying distributions, nor the nature of their inter-class differences. A sparse variant of the method is introduced to identify features responsible for the differences. We provide algorithms for both the original minimax formulation as well as its semidefinite relaxation. In addition to deriving some convergence results, we illustrate how the approach may be applied to identify differences between cell populations in the somatosensory cortex and hippocampus as manifested by single cell RNA-seq. Our broader framework extends beyond the specific choice of Wasserstein divergence.
Principal Orthogonal ComplEment Thresholding
(POET)
Estimate large covariance matrices in approximate factor models by thresholding principal orthogonal complements.
POET
Principal Stratification Sensitivity Analyses sensitivityPStrat
Principal Variance Component Analysis
(PVCA)
Often times ‘batch effects’ are present in microarray data due to any number of factors, including e.g. a poor experimental design or when the gene expression data is combined from different studies with limited standardization. To estimate the variability of experimental effects including batch, a novel hybrid approach known as principal variance component analysis (PVCA) has been developed. The approach leverages the strengths of two very popular data analysis methods: first, principal component analysis (PCA) is used to efficiently reduce data dimension with maintaining the majority of the variability in the data, and variance components analysis (VCA) fits a mixed linear model using factors of interest as random effects to estimate and partition the total variability. The PVCA approach can be used as a screening tool to determine which sources of variability (biological, technical or other) are most prominent in a given microarray data set. Using the eigenvalues associated with their corresponding eigenvectors as weights, associated variations of all factors are standardized and the magnitude of each source of variability (including each batch effect) is presented as a proportion of total variance. Although PVCA is a generic approach for quantifying the corresponding proportion of variation of each effect, it can be a handy assessment for estimating batch effect before and after batch normalization.
Prior Probability In Bayesian statistical inference, a prior probability distribution, often called simply the prior, of an uncertain quantity p is the probability distribution that would express one’s uncertainty about p before some evidence is taken into account. For example, p could be the proportion of voters who will vote for a particular politician in a future election. It is meant to attribute uncertainty, rather than randomness, to the uncertain quantity. The unknown quantity may be a parameter or latent variable. One applies Bayes’ theorem, multiplying the prior by the likelihood function and then normalizing, to get the posterior probability distribution, which is the conditional distribution of the uncertain quantity, given the data. A prior is often the purely subjective assessment of an experienced expert. Some will choose a conjugate prior when they can, to make calculation of the posterior distribution easier. Parameters of prior distributions are called hyperparameters, to distinguish them from parameters of the model of the underlying data.
Private Incremental Regression Data is continuously generated by modern data sources, and a recent challenge in machine learning has been to develop techniques that perform well in an incremental (streaming) setting. In this paper, we investigate the problem of private machine learning, where as common in practice, the data is not given at once, but rather arrives incrementally over time. We introduce the problems of private incremental ERM and private incremental regression where the general goal is to always maintain a good empirical risk minimizer for the history observed under differential privacy. Our first contribution is a generic transformation of private batch ERM mechanisms into private incremental ERM mechanisms, based on a simple idea of invoking the private batch ERM procedure at some regular time intervals. We take this construction as a baseline for comparison. We then provide two mechanisms for the private incremental regression problem. Our first mechanism is based on privately constructing a noisy incremental gradient function, which is then used in a modified projected gradient procedure at every timestep. This mechanism has an excess empirical risk of $\approx\sqrt{d}$, where $d$ is the dimensionality of the data. While from the results of [Bassily et al. 2014] this bound is tight in the worst-case, we show that certain geometric properties of the input and constraint set can be used to derive significantly better results for certain interesting regression problems.
Privileged Multi-Label Learning
(PrML)
This paper presents privileged multi-label learning (PrML) to explore and exploit the relationship between labels in multi-label learning problems. We suggest that for each individual label, it cannot only be implicitly connected with other labels via the low-rank constraint over label predictors, but also its performance on examples can receive the explicit comments from other labels together acting as an \emph{Oracle teacher}. We generate privileged label feature for each example and its individual label, and then integrate it into the framework of low-rank based multi-label learning. The proposed algorithm can therefore comprehensively explore and exploit label relationships by inheriting all the merits of privileged information and low-rank constraints. We show that PrML can be efficiently solved by dual coordinate descent algorithm using iterative optimization strategy with cheap updates. Experiments on benchmark datasets show that through privileged label features, the performance can be significantly improved and PrML is superior to several competing methods in most cases.
Probabilistic Computing The MIT Probabilistic Computing Project aims to build software and hardware systems that augment human and machine intelligence. We are currently focused on probabilistic programming. Probabilistic programming is an emerging field that draws on probability theory, programming languages, and systems programming to provide concise, expressive languages for modeling and general-purpose inference engines that both humans and machines can use. Our research projects include BayesDB and Picture, domain-specific probabilistic programming platforms aimed at augmenting intelligence in the fields of data science and computer vision, respectively. BayesDB, which is open source and in use by organizations like the Bill & Melinda Gates Foundation and JPMorgan, lets users who lack statistics training understand the probable implications of data by writing queries in a simple, SQL-like language. Picture, a probabilistic language being developed in collaboration with Microsoft, lets users solve hard computer vision problems such as inferring 3D models of faces, human bodies and novel generic objects from single images by writing short (<50 line) computer graphics programs that generate and render random scenes. Unlike bottom-up vision algorithms, Picture programs build on prior knowledge about scene structure and produce complete 3D wireframes that people can manipulate using ordinary graphics software. The core platform for our research is Venture, an interactive platform suitable for teaching and applications in fields ranging from statistics to robotics.
“BayesDB”
Probabilistic Data Structure Probabilistic data structures are a group of data structures that are extremely useful for big data and streaming applications. Generally speaking, these data structures use hash functions to randomize and compactly represent a set of items. Collisions are ignored but errors can be well-controlled under certain threshold. Comparing with error-free approaches, these algorithms use much less memory and have constant query time. They usually support union and intersection operations and therefore can be easily parallelized.
http://…/Category:Probabilistic_data_structures
Probabilistic D-Clustering We present a new iterative method for probabilistic clustering of data. Given clusters, their centers and the distances of data points from these centers, the probability of cluster membership at any point is assumed inversely proportional to the distance from (the center of) the cluster in question. This assumption is our working principle. The method is a generalization, to several centers, of theWeiszfeld method for solving the Fermat-Weber location problem. At each iteration, the distances (Euclidean, Mahalanobis, etc.) from the cluster centers are computed for all data points, and the centers are updated as convex combinations of these points, with weights determined by the above principle. Computations stop when the centers stop moving. Progress is monitored by the joint distance function, a measure of distance from all cluster centers, that evolves during the iterations, and captures the data in its low contours. The method is simple, fast (requiring a small number of cheap iterations) and insensitive to outliers.
Probabilistic Dependency Networks “Dependency Network”
Probabilistic Distance Clustering
(PD-clustering)
Probabilistic distance clustering (PD-clustering) is an iterative, distribution free, probabilistic clustering method. PD-clustering assigns units to a cluster according to their probability of membership, under the constraint that the product of the probability and the distance of each point to any cluster centre is a constant. PD-clustering is a flexible method that can be used with non-spherical clusters, outliers, or noisy data. Facto PD-clustering (FPDC) is a recently proposed factor clustering method that involves a linear transformation of variables and a cluster optimizing the PD-clustering criterion. It allows clustering of high dimensional data sets.
Probabilistic Event Calculus
(PEC)
We present PEC, an Event Calculus (EC) style action language for reasoning about probabilistic causal and narrative information. It has an action language style syntax similar to that of the EC variant Modular-E. Its semantics is given in terms of possible worlds which constitute possible evolutions of the domain, and builds on that of EFEC, an epistemic extension of EC. We also describe an ASP implementation of PEC and show the sense in which this is sound and complete.
Probabilistic Graphical Model
(PGM)
Uncertainty is unavoidable in real-world applications: we can almost never predict with certainty what will happen in the future, and even in the present and the past, many important aspects of the world are not observed with certainty. Probability theory gives us the basic foundation to model our beliefs about the different possible states of the world, and to update these beliefs as new evidence is obtained. These beliefs can be combined with individual preferences to help guide our actions, and even in selecting which observations to make. While probability theory has existed since the 17th century, our ability to use it effectively on large problems involving many inter-related variables is fairly recent, and is due largely to the development of a framework known as Probabilistic Graphical Models (PGMs). This framework, which spans methods such as Bayesian networks and Markov random fields, uses ideas from discrete data structures in computer science to efficiently encode and manipulate probability distributions over high-dimensional spaces, often involving hundreds or even many thousands of variables. These methods have been used in an enormous range of application domains, which include: web search, medical and fault diagnosis, image understanding, reconstruction of biological networks, speech recognition, natural language processing, decoding of messages sent over a noisy communication channel, robot navigation, and many more.
“Graphical Model”
Probabilistic Latent Feature Models Probabilistic Latent Feature Models assume that objects and attributes can be represented as a set of binary latent features and that the strength of object-attribute associations can be explained as a non-compensatory (e.g., disjunctive or conjunctive) mapping of latent features.
plfm
Probabilistic Latent Semantic Analysis
(PLSA)
Probabilistic latent semantic analysis (PLSA), also known as probabilistic latent semantic indexing (PLSI, especially in information retrieval circles) is a statistical technique for the analysis of two-mode and co-occurrence data. In effect, one can derive a low-dimensional representation of the observed variables in terms of their affinity to certain hidden variables, just as in latent semantic analysis. PLSA evolved from latent semantic analysis. Compared to standard latent semantic analysis which stems from linear algebra and downsizes the occurrence tables (usually via a singular value decomposition), probabilistic latent semantic analysis is based on a mixture decomposition derived from a latent class model.
Probabilistic Metric Space A probabilistic metric space is a generalization of metric spaces where the distance is no longer valued in non-negative real numbers, but instead is valued in distribution functions.
Probabilistic Neural Network
(PNN)
A probabilistic neural network (PNN) is a feedforward neural network, which was derived from the Bayesian network and a statistical algorithm called Kernel Fisher discriminant analysis. It was introduced by D.F. Specht in the early 1990s. In a PNN, the operations are organized into a multilayered feedforward network with four layers:
• Input layer
• Hidden layer
• Pattern layer/Summation layer
• Output layer
Probabilistic Neural Programs We present probabilistic neural programs, a framework for program induction that permits flexible specification of both a computational model and inference algorithm while simultaneously enabling the use of deep neural networks. Probabilistic neural programs combine a computation graph for specifying a neural network with an operator for weighted nondeterministic choice. Thus, a program describes both a collection of decisions as well as the neural network architecture used to make each one. We evaluate our approach on a challenging diagram question answering task where probabilistic neural programs correctly execute nearly twice as many programs as a baseline model.
Probabilistic Partial Least Squares
(PPLS)
With a rapid increase in volume and complexity of data sets there is a need for methods that can extract useful information in these data sets. Dimension reduction approaches such as Partial least squares (PLS) are increasingly being utilized for finding relationships between two data sets. However these methods often lack a probabilistic formulation, hampering development of more flexible models. Moreover dimension reduction methods in general suffer from identifiability problems, causing difficulties in combining and comparing results from multiple studies. We propose Probabilistic PLS (PPLS) as an extension of PLS to model the overlap between two data sets. The likelihood formulation provides opportunities to address issues typically present in data, such as missing entries and heterogeneity between subjects. We show that the PPLS parameters are identifiable up to sign. We derive Maximum Likelihood estimators that respect the identifiability conditions by using an EM algorithm with a constrained optimization in the M step. A simulation study is conducted and we observe a good performance of the PPLS estimates in various scenarios, when compared to PLS estimates. Most notably the estimates seem to be robust against departures from normality. To illustrate the PPLS model, we apply it to real IgG glycan data from two cohorts. We infer the contributions of each variable to the correlated part and observe very similar behavior across cohorts.
Probabilistic Programming A probabilistic programming language is a high-level language that makes it easy for a developer to define probability models and then ‘solve’ these models automatically. These languages incorporate random events as primitives and their runtime environment handles inference. Now, it is a matter of programming that enables a clean separation between modeling and inference. This can vastly reduce the time and effort associated with implementing new models and understanding data. Just as high-level programming languages transformed developer productivity by abstracting away the details of the processor and memory architecture, probabilistic languages promise to free the developer from the complexities of high-performance probabilistic inference.
Probabilistic-Programming.org
Probabilistic Programming for Advancing Machine Learning
(PPAML)
Machine learning – the ability of computers to understand data, manage results and infer insights from uncertain information – is the force behind many recent revolutions in computing. Email spam filters, smartphone personal assistants and self-driving vehicles are all based on research advances in machine learning. Unfortunately, even as the demand for these capabilities is accelerating, every new application requires a Herculean effort. Teams of hard-to-find experts must build expensive, custom tools that are often painfully slow and can perform unpredictably against large, complex data sets.
The Probabilistic Programming for Advancing Machine Learning (PPAML) program aims to address these challenges. Probabilistic programming is a new programming paradigm for managing uncertain information. Using probabilistic programming languages, PPAML seeks to greatly increase the number of people who can successfully build machine learning applications and make machine learning experts radically more effective. Moreover, the program seeks to create more economical, robust and powerful applications that need less data to produce more accurate results – features inconceivable with today’s technology.
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Probabilistic Programming Language
(PPL)
A probabilistic programming language (PPL) is a programming language designed to describe probabilistic models and then perform inference in those models. PPLs are closely related to graphical models and Bayesian networks, but are more expressive and flexible. Probabilistic programming represents an attempt to ‘ general purpose programming with probabilistic modeling.’ Probabilistic reasoning is a foundational technology of machine learning. It is used by companies such as Google, Amazon.com and Microsoft. Probabilistic reasoning has been used for predicting stock prices, recommending movies, diagnosing computers, detecting cyber intrusions and image detection. PPLs often extend from a basic language. The choice of underlying basic language depends on the similarity of the model to the basic language’s ontology, as well as commercial considerations and personal preference. For instance, Dimple and Chimple are based on Java, Infer.NET is based on .NET framework, while PRISM extends from Prolog. However, some PPLs such as WinBUGS and Stan offer a self-contained language, with no obvious origin in another language. Several PPLs are in active development, including some in beta test.
Probabilistic Record Linkage Probabilistic Record Linkage (Probabilistic Linkage) is a method that uses properties of variables common to databases to determine the probability that two records refer to the same person and/or event.
Probabilistic record linkage offers a way of integrating data from different sources where there is no shared unique identifier.
• It raises a wide range of issues from highly technical statistics to legislation and public perception.
• But it is not without its difficulties.
• Clerical review is time consuming (and therefore expensive), repetitive and requires constant concentration.
• But without it error rates increase.
• Even so, it may be the future for data integration (e.g. the proposed Data Linkage Centre).
Probability Collectives
(PC)
Probability Collectives is a broad framework for analyzing and controlling distributed systems. It is based on deep formal connections relating game theory, statistical physics, and distributed control/optimization.
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Probability Density Function
(PDF)
In probability theory, a probability density function (pdf), or density of a continuous random variable, is a function that describes the relative likelihood for this random variable to take on a given value. The probability of the random variable falling within a particular range of values is given by the integral of this variable’s density over that range – that is, it is given by the area under the density function but above the horizontal axis and between the lowest and greatest values of the range. The probability density function is nonnegative everywhere, and its integral over the entire space is equal to one.
Probability Mass Function
(PMF)
In probability theory and statistics, a probability mass function (pmf) is a function that gives the probability that a discrete random variable is exactly equal to some value. The probability mass function is often the primary means of defining a discrete probability distribution, and such functions exist for either scalar or multivariate random variables whose domain is discrete. A probability mass function differs from a probability density function (pdf) in that the latter is associated with continuous rather than discrete random variables; the values of the latter are not probabilities as such: a pdf must be integrated over an interval to yield a probability.
Ake
Probability of Default
(PD)
Probability of default (PD) is a financial term describing the likelihood of a default over a particular time horizon. It provides an estimate of the likelihood that a borrower will be unable to meet its debt obligations. PD is used in a variety of credit analyses and risk management frameworks. Under Basel II, it is a key parameter used in the calculation of economic capital or regulatory capital for a banking institution.
LDPD
Probability of Default Calibration “Probability of Default”
LDPD
Probability of Exceedance
(POE)
The ‘probability of exceedance’ curves give the forecast probability that a temperature or precipitation quantity, shown on the horizontal axis, will be exceeded at the location in question, for the given season at the given lead time.
http://…5868_calculate-exceedance-probability.htm
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Probability of Informed Trading
(PIN)
Introduced by Easley et. al. (1996) <doi:10.1111/j.1540-6261.1996.tb04074.x> .
InfoTrad
Probability Theory Probability theory is the branch of mathematics concerned with probability, the analysis of random phenomena. The central objects of probability theory are random variables, stochastic processes, and events: mathematical abstractions of non-deterministic events or measured quantities that may either be single occurrences or evolve over time in an apparently random fashion. If an individual coin toss or the roll of dice is considered to be a random event, then if repeated many times the sequence of random events will exhibit certain patterns, which can be studied and predicted. Two representative mathematical results describing such patterns are the law of large numbers and the central limit theorem. As a mathematical foundation for statistics, probability theory is essential to many human activities that involve quantitative analysis of large sets of data. Methods of probability theory also apply to descriptions of complex systems given only partial knowledge of their state, as in statistical mechanics. A great discovery of twentieth century physics was the probabilistic nature of physical phenomena at atomic scales, described in quantum mechanics.
Probably Approximately Correct Learning
(PAC Learning,WARL)
In computational learning theory, probably approximately correct learning (PAC learning) is a framework for mathematical analysis of machine learning. It was proposed in 1984 by Leslie Valiant. In this framework, the learner receives samples and must select a generalization function (called the hypothesis) from a certain class of possible functions. The goal is that, with high probability (the “probably” part), the selected function will have low generalization error (the “approximately correct” part). The learner must be able to learn the concept given any arbitrary approximation ratio, probability of success, or distribution of the samples. The model was later extended to treat noise (misclassified samples). An important innovation of the PAC framework is the introduction of computational complexity theory concepts to machine learning. In particular, the learner is expected to find efficient functions (time and space requirements bounded to a polynomial of the example size), and the learner itself must implement an efficient procedure (requiring an example count bounded to a polynomial of the concept size, modified by the approximation and likelihood bounds).
Probably Certifiably Correct Algorithm
(PCC)
Many optimization problems of interest are known to be intractable, and while there are often heuristics that are known to work on typical instances, it is usually not easy to determine a posteriori whether the optimal solution was found. In this short note, we discuss algorithms that not only solve the problem on typical instances, but also provide a posteriori certificates of optimality, probably certifiably correct (PCC) algorithms. As an illustrative example, we present a fast PCC algorithm for minimum bisection under the stochastic block model and briefly discuss other examples.
probit In probability theory and statistics, the probit function is the quantile function associated with the standard normal distribution. It has applications in exploratory statistical graphics and specialized regression modeling of binary response variables.
Procedural Content Generation via Machine Learning
(PCGML)
This survey explores Procedural Content Generation via Machine Learning (PCGML), defined as the generation of game content using machine learning models trained on existing content. As the importance of PCG for game development increases, researchers explore new avenues for generating high-quality content with or without human involvement; this paper addresses the relatively new paradigm of using machine learning (in contrast with search-based, solver-based, and constructive methods). We focus on what is most often considered functional game content such as platformer levels, game maps, interactive fiction stories, and cards in collectible card games, as opposed to cosmetic content such as sprites and sound effects. In addition to using PCG for autonomous generation, co-creativity, mixed-initiative design, and compression, PCGML is suited for repair, critique, and content analysis because of its focus on modeling existing content. We discuss various data sources and representations that affect the resulting generated content. Multiple PCGML methods are covered, including neural networks, long short-term memory (LSTM) networks, autoencoders, and deep convolutional networks; Markov models, $n$-grams, and multi-dimensional Markov chains; clustering; and matrix factorization. Finally, we discuss open problems in the application of PCGML, including learning from small datasets, lack of training data, multi-layered learning, style-transfer, parameter tuning, and PCG as a game mechanic.
Process Mining Process mining is a process management technique that allows for the analysis of business processes based on event logs. The basic idea is to extract knowledge from event logs recorded by an information system. Process mining aims at improving this by providing techniques and tools for discovering process, control, data, organizational, and social structures from event logs.
Process Mining
Procrustes Analysis In statistics, Procrustes analysis is a form of statistical shape analysis used to analyse the distribution of a set of shapes. The name Procrustes refers to a bandit from Greek mythology who made his victims fit his bed either by stretching their limbs or cutting them off.
Product Community Question Answering
(PCQA)
Product Community Question Answering (PCQA) provides useful information about products and their features (aspects) that may not be well addressed by product descriptions and reviews. We observe that a product’s compatibility issues with other products are frequently discussed in PCQA and such issues are more frequently addressed in accessories, i.e., via a yes/no question ‘Does this mouse work with windows 10?’. In this paper, we address the problem of extracting compatible and incompatible products from yes/no questions in PCQA. This problem can naturally have a two-stage framework: first, we perform Complementary Entity (product) Recognition (CER) on yes/no questions; second, we identify the polarities of yes/no answers to assign the complementary entities a compatibility label (compatible, incompatible or unknown). We leverage an existing unsupervised method for the first stage and a 3-class classifier by combining a distant PU-learning method (learning from positive and unlabeled examples) together with a binary classifier for the second stage. The benefit of using distant PU-learning is that it can help to expand more implicit yes/no answers without using any human annotated data. We conduct experiments on 4 products to show that the proposed method is effective.
Product Intelligence What makes Product Intelligence interesting to us as a field of focus is that it is a superb application for Big Data – providing highly targeted, real time intelligence that serves up insights INSIDE of the new product development process at the exact moment when conclusive, authoritative insight is most needed. When it’s literally make or break.
What Is It?
What differentiates product intelligence from other research? It provides real-time, data-driven insights for new product development decisions and innovation initiatives based on the large multiples – the scale of big data. What features will attract consumers to my product? How do customers perceive it relative to competing products? In which geographic markets will it be the most successful? Product intelligence can tell you this. Imagine this…you’re developing a personal hair care product and you’re looking for a particular niche, let’s say hair color in China, which could be called a mature market. You can listen to 25 people or perhaps 500 or 5000 in focus groups or online panels. Or you can listen to 500,000. That’s the unique advantage and why big data got the name Big.
Product Logarithm
Professor Forcing The Teacher Forcing algorithm trains recurrent networks by supplying observed sequence values as inputs during training and using the network’s own one-step-ahead predictions to do multi-step sampling. We introduce the Professor Forcing algorithm, which uses adversarial domain adaptation to encourage the dynamics of the recurrent network to be the same when training the network and when sampling from the network over multiple time steps. We apply Professor Forcing to language modeling, vocal synthesis on raw waveforms, handwriting generation, and image generation. Empirically we find that Professor Forcing acts as a regularizer, improving test likelihood on character level Penn Treebank and sequential MNIST. We also find that the model qualitatively improves samples, especially when sampling for a large number of time steps. This is supported by human evaluation of sample quality. Trade-offs between Professor Forcing and Scheduled Sampling are discussed. We produce T-SNEs showing that Professor Forcing successfully makes the dynamics of the network during training and sampling more similar.
Profiling In software engineering, profiling (“program profiling”, “software profiling”) is a form of dynamic program analysis that measures, for example, the space (memory) or time complexity of a program, the usage of particular instructions, or frequency and duration of function calls. The most common use of profiling information is to aid program optimization. Profiling is achieved by instrumenting either the program source code or its binary executable form using a tool called a profiler (or code profiler). A number of different techniques may be used by profilers, such as event-based, statistical, instrumented, and simulation methods.
Progressive Expectation Maximization
(PEM)
Projection Matrix A projection matrix P is an nxn square matrix that gives a vector space projection from Rn to a subspace W. The columns of P are the projections of the standard basis vectors, and W is the image of P. A square matrix P is a projection matrix iff P^2 = P.
Projection Pursuit
(PP)
Projection pursuit (PP) is a type of statistical technique which involves finding the most “interesting” possible projections in multidimensional data. Often, projections which deviate more from a normal distribution are considered to be more interesting. As each projection is found, the data are reduced by removing the component along that projection, and the process is repeated to find new projections; this is the “pursuit” aspect that motivated the technique known as matching pursuit. The idea of projection pursuit is to locate the projection or projections from high-dimensional space to low-dimensional space that reveal the most details about the structure of the data set. Once an interesting set of projections has been found, existing structures (clusters, surfaces, etc.) can be extracted and analyzed separately. Projection pursuit has been widely use for blind source separation, so it is very important in independent component analysis. Projection pursuit seek one projection at a time such that the extracted signal is as non-Gaussian as possible
Projection Pursuit Classification Tree
(PPtree)
In this paper, we propose a new classification tree, the projection pursuit classification tree (PPtree). It combines tree structured methods with projection pursuit dimension reduction. This tree is originated from the projection pursuit method for classification. In each node, one of the projection pursuit indices using class information – LDA, L r or PDA indices – is maximized to find the projection with the most separated group view. On this optimized data projection, the tree splitting criteria are applied to separate the groups. These steps are iterated until the last two classes are separated. The main advantages of this tree is that it effectively uses correlation between variables to find separations, and it has visual representation of the differences between groups in a 1-dimensional space that can be used to interpret results. Also in each node of the tree, the projection coefficients represent the variable importance for the group separation. This information is very helpful to select variables in classification problems.
PPtreeViz
Propensity Score Matching
(PSM)
In the statistical analysis of observational data, propensity score matching (PSM) is a statistical matching technique that attempts to estimate the effect of a treatment, policy, or other intervention by accounting for the covariates that predict receiving the treatment. PSM attempts to reduce the bias due to confounding variables that could be found in an estimate of the treatment effect obtained from simply comparing outcomes among units that received the treatment versus those that did not. The technique was first published by Paul Rosenbaum and Donald Rubin in 1983, and implements the Rubin causal model for observational studies.
The possibility of bias arises because the apparent difference in outcome between these two groups of units may depend on characteristics that affected whether or not a unit received a given treatment instead of due to the effect of the treatment per se. In randomized experiments, the randomization enables unbiased estimation of treatment effects; for each covariate, randomization implies that treatment-groups will be balanced on average, by the law of large numbers. Unfortunately, for observational studies, the assignment of treatments to research subjects is typically not random. Matching attempts to mimic randomization by creating a sample of units that received the treatment that is comparable on all observed covariates to a sample of units that did not receive the treatment.
For example, one may be interested to know the consequences of smoking or the consequences of going to university. The people ‘treated’ are simply those – the smokers, or the university graduates – who in the course of everyday life undergo whatever it is that is being studied by the researcher. In both of these cases it is unfeasible (and perhaps unethical) to randomly assign people to smoking or a university education, so observational studies are required. The treatment effect estimated by simply comparing a particular outcome – rate of cancer or life time earnings – between those who smoked and did not smoke or attended university and did not attend university would be biased by any factors that predict smoking or university attendance, respectively. PSM attempts to control for these differences to make the groups receiving treatment and not-treatment more comparable.
Property Graph The term property graph has come to denote an attributed, multi-relational graph. That is, a graph where the edges are labeled and both vertices and edges can have any number of key/value properties associated with them.
Prophet Today Facebook is open sourcing Prophet, a forecasting tool available in Python and R. Forecasting is a data science task that is central to many activities within an organization. For instance, large organizations like Facebook must engage in capacity planning to efficiently allocate scarce resources and goal setting in order to measure performance relative to a baseline. Producing high quality forecasts is not an easy problem for either machines or for most analysts. We have observed two main themes in the practice of creating a variety of business forecasts:
• Completely automatic forecasting techniques can be brittle and they are often too inflexible to incorporate useful assumptions or heuristics.
• Analysts who can produce high quality forecasts are quite rare because forecasting is a specialized data science skill requiring substantial experience.
Proportional Hazards Model Proportional hazards models are a class of survival models in statistics. Survival models relate the time that passes before some event occurs to one or more covariates that may be associated with that quantity of time. In a proportional hazards model, the unique effect of a unit increase in a covariate is multiplicative with respect to the hazard rate. For example, taking a drug may halve one’s hazard rate for a stroke occurring, or, changing the material from which a manufactured component is constructed may double its hazard rate for failure. Other types of survival models such as accelerated failure time models do not exhibit proportional hazards. The accelerated failure time model describes a situation where the biological or mechanical life history of an event is accelerated.
Proportional Subdistribution Hazards
(PSH)
The proportional hazards model for the subdistribution that Fine and Gray (1999) propose aims at modeling the cumulative incidence of an event of interest.
“Proportional Hazards Model”
crrp
Protocols and Structures for Inference
(PSI)
The Protocols and Structures for Inference (PSI) project has developed an architecture for presenting machine learning algorithms, their inputs (data) and outputs (predictors) as resource-oriented RESTful web services in order to make machine learning technology accessible to a broader range of people than just machine learning researchers. Currently, many machine learning implementations (e.g., in toolkits such as Weka, Orange, Elefant, Shogun, SciKit.Learn, etc.) are tied to specific choices of programming language, and data sets to particular formats (e.g., CSV, svmlight, ARFF). This limits their accessibility, since new users may have to learn a new programming language to run a learner or write a parser for a new data format, and their interoperability, requiring data format converters and multiple language platforms. While there is also a growing number of machine learning web services, each has its own API and is tailored to suit a different subset of machine learning activities.
Standardizing the World of Machine Learning Web Service APIs
Proximity Measure In order to understand and act on situations that are represented by a set of objects, very often we are required to compare them. Humans perform this comparison subconsciously using the brain. In the context of artificial intelligence, however, we should be able to describe how the machine might perform this comparison. In this context, one of the basic elements that must be specified is the proximity measure between objects.
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Proximity Variational Inference
(PVI)
Variational inference is a powerful approach for approximate posterior inference. However, it is sensitive to initialization and can be subject to poor local optima. In this paper, we develop proximity variational inference (PVI). PVI is a new method for optimizing the variational objective that constrains subsequent iterates of the variational parameters to robustify the optimization path. Consequently, PVI is less sensitive to initialization and optimization quirks and finds better local optima. We demonstrate our method on three proximity statistics. We study PVI on a Bernoulli factor model and sigmoid belief network with both real and synthetic data and compare to deterministic annealing (Katahira et al., 2008). We highlight the flexibility of PVI by designing a proximity statistic for Bayesian deep learning models such as the variational autoencoder (Kingma and Welling, 2014; Rezende et al., 2014). Empirically, we show that PVI consistently finds better local optima and gives better predictive performance.
Proximity-Ambiguity Sensitive
(PAS)
Distributed representations of words (aka word embedding) have proven helpful in solving natural language processing (NLP) tasks. Training distributed representations of words with neural networks has lately been a major focus of researchers in the field. Recent work on word embedding, the Continuous Bag-of-Words (CBOW) model and the Continuous Skip-gram (Skip-gram) model, have produced particularly impressive results, significantly speeding up the training process to enable word representation learning from largescale data. However, both CBOW and Skip-gram do not pay enough attention to word proximity in terms of model or word ambiguity in terms of linguistics. In this paper, we propose Proximity-Ambiguity Sensitive (PAS) models (i.e. PAS CBOW and PAS Skip-gram) to produce high quality distributed representations of words considering both word proximity and ambiguity. From the model perspective, we introduce proximity weights as parameters to be learned in PAS CBOW and used in PAS Skip-gram. By better modeling word proximity, we reveal the strength of pooling-structured neural networks in word representation learning. The proximitysensitive pooling layer can also be applied to other neural network applications that employ pooling layers. From the linguistics perspective, we train multiple representation vectors per word. Each representation vector corresponds to a particular group of POS tags of the word. By using PAS models, we achieved a 16.9% increase in accuracy over state-of-theart models.
Pruned Exact Linear Time
(PELT)
This approach is based on the algorithm of Jackson et al. (2005 (‘An algorithm for optimal partitioning of data on an interval’)) , but involves a pruning step within the dynamic program. This pruning reduces the computational cost of the method, but does not affect the exactness of the resulting segmentation. It can be applied to find changepoints under a range of statistical criteria such as penalised likelihood, quasi-likelihood (Braun et al., 2000 (‘Multiple changepoint fitting via quasilikelihood, with application to DNA sequence segmentation’)) and cumulative sum of squares (Inclan and Tiao, 1994 (‘Use of cumulative sums of squares for retrospective detection of changes of variance.’); Picard et al., 2011 (‘Joint segmentation, calling and normalization of multiple cgh profiles’)). In simulations we compare PELT with both Binary Segmentation and Optimal Partitioning. We show that PELT can be calculated orders of magnitude faster than Optimal Partitioning, particularly for long data sets. Whilst asymptotically PELT can be quicker, we find that in practice Binary Segmentation is quicker on the examples we consider, and we believe this would be the case in almost all applications. However, we show that PELT leads to a substantially more accurate segmentation than Binary Segmentation.
changepoint
Pruning Pruning is a technique in machine learning that reduces the size of decision trees by removing sections of the tree that provide little power to classify instances. The dual goal of pruning is reduced complexity of the final classifier as well as better predictive accuracy by the reduction of overfitting and removal of sections of a classifier that may be based on noisy or erroneous data.
PSDVec PSDVec is a Python/Perl toolbox that learns word embeddings, i.e. the mapping of words in a natural language to continuous vectors which encode the semantic/syntactic regularities between the words. PSDVec implements a word embedding learning method based on a weighted low-rank positive semidefinite approximation. To scale up the learning process, we implement a blockwise online learning algorithm to learn the embeddings incrementally. This strategy greatly reduces the learning time of word embeddings on a large vocabulary, and can learn the embeddings of new words without re-learning the whole vocabulary. On 9 word similarity/analogy benchmark sets and 2 Natural Language Processing (NLP) tasks, PSDVec produces embeddings that has the best average performance among popular word embedding tools. PSDVec provides a new option for NLP practitioners.
PUN-list In this paper, we propose a novel data structure called PUN-list, which maintains both the utility information about an itemset and utility upper bound for facilitating the processing of mining high utility itemsets. Based on PUN-lists, we present a method, called MIP (Mining high utility Itemset using PUN-Lists), for fast mining high utility itemsets. The efficiency of MIP is achieved with three techniques. First, itemsets are represented by a highly condensed data structure, PUN-list, which avoids costly, repeatedly utility computation. Second, the utility of an itemset can be efficiently calculated by scanning the PUN-list of the itemset and the PUN-lists of long itemsets can be fast constructed by the PUN-lists of short itemsets. Third, by employing the utility upper bound lying in the PUN-lists as the pruning strategy, MIP directly discovers high utility itemsets from the search space, called set-enumeration tree, without generating numerous candidates. Extensive experiments on various synthetic and real datasets show that PUN-list is very effective since MIP is at least an order of magnitude faster than recently reported algorithms on average.
PyCharm PyCharm is an Integrated Development Environment (IDE) used in computer programming, specifically for the Python language. It is developed by the Czech company JetBrains. It provides code analysis, a graphical debugger, an integrated unit tester, integration with version control systems (VCSes), and supports web development with Django. PyCharm is cross-platform, with Windows, macOS and Linux versions. The Community Edition is released under the Apache License, and there is also Professional Edition released under a proprietary license – this has extra features.
Pycnophylactic Interpolation Thiessen polygon’s are an extreme case – we assume homogeneity within the polygons and abrupt changes at the borders This is unlikely to be correct – for example, precipitation or population totals don’t have abrupt changes at arbitrary borders Tobler developed pycnophylactic interpolation to overcome this problem. Here, values are reassigned by mass-preserving reallocation. The basic principle is that the volume of the attribute within a region remains the same. However, it is assumed that a better representation of the variation is a smooth surface. The volume (the sum within each region) remains constant, whilst the surface becomes smoother. The solution is iterative – the stopping point is arbitrary.
pycno
PyMC3 Probabilistic Programming (PP) allows flexible specification of statistical Bayesian models in code. PyMC3 is a new, open-source PP framework with an intutive and readable, yet powerful, syntax that is close to the natural syntax statisticians use to describe models. It features next-generation Markov chain Monte Carlo (MCMC) sampling algorithms such as the No-U-Turn Sampler (NUTS; Hoffman, 2014), a self-tuning variant of Hamiltonian Monte Carlo (HMC; Duane, 1987). This class of samplers work well on high dimensional and complex posterior distributions and allows many complex models to be fit without specialized knowledge about fitting algorithms. HMC and NUTS take advantage of gradient information from the likelihood to achieve much faster convergence than traditional sampling methods, especially for larger models. NUTS also has several self-tuning strategies for adaptively setting the tunable parameters of Hamiltonian Monte Carlo, which means you usually don’t need to have specialized knowledge about how the algorithms work. PyMC3, Stan (Stan Development Team, 2014), and the LaplacesDemon package for R are currently the only PP packages to offer HMC.
pyRecLab This paper introduces pyRecLab, a software library written in C++ with Python bindings which allows to quickly train, test and develop recommender systems. Although there are several software libraries for this purpose, only a few let developers to get quickly started with the most traditional methods, permitting them to try different parameters and approach several tasks without a significant loss of performance. Among the few libraries that have all these features, they are available in languages such as Java, Scala or C#, what is a disadvantage for less experienced programmers more used to the popular Python programming language. In this article we introduce details of pyRecLab, showing as well performance analysis in terms of error metrics (MAE and RMSE) and train/test time. We benchmark it against the popular Java-based library LibRec, showing similar results. We expect programmers with little experience and people interested in quickly prototyping recommender systems to be benefited from pyRecLab.
PyStruct PyStruct aims at being an easy-to-use structured learning and prediction library. Currently it implements only max-margin methods and a perceptron, but other algorithms might follow. The learning algorithms implemented in PyStruct have various names, which are often used loosely or differently in different communities. Common names are conditional random fields (CRFs), maximum-margin Markov random fields (M3N) or structural support vector machines. If you are new to structured learning, have a look at What is structured learning?. The goal of PyStruct is to provide a well-documented tool for researchers as well as non-experts to make use of structured prediction algorithms. The design tries to stay as close as possible to the interface and conventions of scikit-learn.
Python Package Index
(PyPI)
The Python Package Index is a repository of software for the Python programming language.
Pyxley Web-based dashboards are the most straightforward way to share insights with clients and business partners. For R users, Shiny provides a framework that allows data scientists to create interactive web applications without having to write Javascript, HTML, or CSS. Despite Shiny’s utility and success as a dashboard framework, there is no equivalent in Python. There are packages in development, such as Spyre, but nothing that matches Shiny’s level of customization. We have written a Python package, called Pyxley, to not only help simplify the development of web-applications, but to provide a way to easily incorporate custom Javascript for maximum flexibility. This is enabled through Flask, PyReact, and Pandas.
Pyxley: Python Powered Dashboards
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